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  5. LOC_Os09g39780.2

LOC_Os09g39780.2 (ROC2, LOC_Os09g39780)


Aliases : ROC2, LOC_Os09g39780

Description : protein folding catalyst


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g39780.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00179330 ROC2,... Protein modification.protein folding and quality... 0.04 OrthoFinder output from all 47 species
AMTR_s00041p00200040 ROC3,... Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
AT3G56070 ROC2 rotamase cyclophilin 2 0.03 OrthoFinder output from all 47 species
Adi_g016344 No alias EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g017075 No alias EC_5.2 cis-trans-isomerase & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g128188 CYP5, ATCYP5, CYP19-4 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05955 ROC1 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13368 No alias EC_5.2 cis-trans-isomerase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g62881 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0176.g056010 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=207-734 0.05 OrthoFinder output from all 47 species
Cba_g12199 ROC5, ATCYP1 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71186 CYP5, ATCYP5, CYP19-4 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G067200.1 CYP40, SQN,... EC_5.2 cis-trans-isomerase & original description:... 0.05 OrthoFinder output from all 47 species
Ehy_g20933 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09239 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g21570.1 CYP5, ATCYP5, CYP19-4 protein folding catalyst 0.02 OrthoFinder output from all 47 species
Nbi_g03408 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38062 No alias EC_5.2 cis-trans-isomerase & original description: none 0.06 OrthoFinder output from all 47 species
Smo111263 ROC7 Protein modification.protein folding and quality... 0.04 OrthoFinder output from all 47 species
Solyc11g006070.3.1 Solyc11g006070 protein folding catalyst 0.04 OrthoFinder output from all 47 species
Zm00001e032890_P001 ROC2, Zm00001e032890 protein folding catalyst 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 16 171
No external refs found!