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  5. LOC_Os10g02230.1

LOC_Os10g02230.1 (LOC_Os10g02230)


Aliases : LOC_Os10g02230

Description : no hits & (original description: none)


Gene families : OG0000021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g02230.1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00183540 ATPTR3, PTR3,... Solute transport.carrier-mediated transport.MFS... 0.04 OrthoFinder output from all 47 species
AMTR_s00099p00121400 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.02 OrthoFinder output from all 47 species
AT1G22550 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g07186 PTR1, ATPTR1 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25810 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33706 NRT1.7 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30705 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30813 No alias anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25886.t1 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g29387 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48699 PTR1, ATPTR1 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01657 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21753 No alias anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g04950.1 PTR1, ATPTR1,... anion transporter (NRT1/PTR) 0.04 OrthoFinder output from all 47 species
LOC_Os04g39030.1 LOC_Os04g39030 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
LOC_Os05g27050.1 LOC_Os05g27050 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
LOC_Os12g14764.1 LOC_Os12g14764 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g44110.2 LOC_Os12g44110 anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
Len_g40690 PTR5, ATPTR5 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28726 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10437216g0010 No alias anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
MA_107155g0010 No alias anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
MA_139294g0010 PTR5, ATPTR5 anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
MA_37390g0010 No alias anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
Msp_g37337 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g14238 PTR1, ATPTR1 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06126 PTR1, ATPTR1 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25986 NRT1.7 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62729 NRT1.5 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 124 209
No external refs found!