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  5. LOC_Os10g02300.3

LOC_Os10g02300.3 (LOC_Os10g02300)


Aliases : LOC_Os10g02300

Description : Cell number regulator 10 OS=Zea mays (sp|d9hp26|cnr10_maize : 133.0)


Gene families : OG0000293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g02300.3
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00033430 evm_27.TU.AmTr_v1... Cell number regulator 10 OS=Zea mays 0.04 OrthoFinder output from all 47 species
AT1G14880 PCR1 PLANT CADMIUM RESISTANCE 1 0.06 OrthoFinder output from all 47 species
AT1G52200 No alias PLAC8 family protein 0.05 OrthoFinder output from all 47 species
AT1G58320 No alias PLAC8 family protein 0.03 OrthoFinder output from all 47 species
AT2G40935 No alias PLAC8 family protein 0.03 OrthoFinder output from all 47 species
AT5G35525 No alias PLAC8 family protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene13588.t1 Aspi01Gene13588 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G000300.1 Ceric.19G000300 not classified & original description: pacid=50576139... 0.03 OrthoFinder output from all 47 species
Ceric.31G000100.1 Ceric.31G000100 not classified & original description: pacid=50575022... 0.05 OrthoFinder output from all 47 species
Dde_g16541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011687001 PCR2 Cell number regulator 2 OS=Zea mays 0.07 OrthoFinder output from all 47 species
GSVIVT01031753001 No alias Cell number regulator 1 OS=Zea mays 0.04 OrthoFinder output from all 47 species
GSVIVT01031754001 PCR2 Cell number regulator 1 OS=Zea mays 0.04 OrthoFinder output from all 47 species
Gb_14595 No alias Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_37164 No alias Cell number regulator 2 OS=Zea mays... 0.05 OrthoFinder output from all 47 species
LOC_Os03g61470.1 LOC_Os03g61470 Cell number regulator 10 OS=Zea mays... 0.04 OrthoFinder output from all 47 species
LOC_Os03g61480.1 LOC_Os03g61480 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g49051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_7245g0010 PCR11 Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp1g10640.1 No alias Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pnu_g12870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011838 No alias not classified & original description: CDS=150-581 0.03 OrthoFinder output from all 47 species
Sam_g35007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g005470.3.1 PCR2, Solyc01g005470 Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc03g119660.2.1 Solyc03g119660 Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g009620.4.1 Solyc05g009620 Protein PLANT CADMIUM RESISTANCE 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc06g066590.4.1 Solyc06g066590 Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e011704_P001 PCR2, Zm00001e011704 Cell number regulator 10 OS=Zea mays... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 50 150
No external refs found!