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  5. LOC_Os10g02600.1

LOC_Os10g02600.1 (LOC_Os10g02600)


Aliases : LOC_Os10g02600

Description : no hits & (original description: none)


Gene families : OG0009044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g02600.1
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
ChrSy.fgenesh.mRNA.15 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.16 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.31 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
LOC_Os02g29280.1 LOC_Os02g29280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g53090.1 LOC_Os02g53090 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g19830.1 LOC_Os06g19830 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g01360.1 LOC_Os07g01360 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g15250.1 LOC_Os07g15250 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g30300.1 LOC_Os08g30300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g26960.1 LOC_Os10g26960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g12400.1 LOC_Os12g12400 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g30790.1 KS, KS1, ATKS1,... Ent-sandaracopimara-8(14),15-diene synthase OS=Oryza... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA

No InterPro domains available for this sequence

No external refs found!