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  5. LOC_Os10g02770.1

LOC_Os10g02770.1 (EXGT-A2, XTH28, XTR2,...)


Aliases : EXGT-A2, XTH28, XTR2, ATXTH28, LOC_Os10g02770

Description : Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana (sp|q38909|xth28_arath : 395.0) & Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase(50.2.4 : 214.6)


Gene families : OG0000942 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000942_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g02770.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00167480 XTH32,... Enzyme classification.EC_2 transferases.EC_2.4... 0.03 OrthoFinder output from all 47 species
AMTR_s00048p00113910 XTH27, ATXTH27,... Enzyme classification.EC_2 transferases.EC_2.4... 0.02 OrthoFinder output from all 47 species
AMTR_s00082p00180450 XTH32,... Cell wall.hemicellulose.xyloglucan.modification and... 0.04 OrthoFinder output from all 47 species
Aop_g08427 EXGT-A2, XTH28,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36656 EXGT-A2, XTH28,... EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene30624.t2 EXGT-A2, XTH28,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42564.t1 EXGT-A2, XTH28,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10888 EXGT-A2, XTH28,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15762 XTR4, XTH30 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05609 EXGT-A2, XTH28,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_07224 XTH32 xyloglucan endotransglucosylase/hydrolase 0.03 OrthoFinder output from all 47 species
Gb_17580 XET, XTH33 Probable xyloglucan endotransglucosylase/hydrolase... 0.05 OrthoFinder output from all 47 species
Gb_33516 XTH27, ATXTH27, EXGT-A3 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
LOC_Os09g23220.1 EXGT-A2, XTH28,... Probable xyloglucan endotransglucosylase/hydrolase... 0.06 OrthoFinder output from all 47 species
Lfl_g26509 EXGT-A2, XTH28,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
MA_134633g0030 XTH32 Probable xyloglucan endotransglucosylase/hydrolase... 0.02 OrthoFinder output from all 47 species
MA_19440g0010 XTH32 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
MA_75919g0010 XTH32 Probable xyloglucan endotransglucosylase/hydrolase... 0.04 OrthoFinder output from all 47 species
Ppi_g02844 XTH27, ATXTH27, EXGT-A3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60042 EXGT-A2, XTH28,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36619 No alias EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g081060.4.1 XTR4, XTH30,... Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Zm00001e015512_P001 XTR4, XTH30,... Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Zm00001e023553_P001 XTH32, Zm00001e023553 xyloglucan endotransglucosylase/hydrolase 0.08 OrthoFinder output from all 47 species
Zm00001e034059_P001 EXGT-A2, XTH28,... Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
CC GO:0005618 cell wall IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
BP GO:0006073 cellular glucan metabolic process IEA Interproscan
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA Interproscan
CC GO:0048046 apoplast IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000757 GH16 49 229
IPR010713 XET_C 268 303
No external refs found!