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  5. LOC_Os10g07400.2

LOC_Os10g07400.2 (LOC_Os10g07400)


Aliases : LOC_Os10g07400

Description : Putative disease resistance protein RGA1 OS=Solanum bulbocastanum (sp|q7xa42|rga1_solbu : 345.0)


Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g07400.2
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01001399001 RLK1 G-type lectin S-receptor-like serine/threonine-protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01001457001 No alias Putative disease resistance RPP13-like protein 1... 0.02 OrthoFinder output from all 47 species
GSVIVT01012443001 No alias Putative disease resistance RPP13-like protein 1... 0.02 OrthoFinder output from all 47 species
GSVIVT01013310001 No alias Putative disease resistance RPP13-like protein 1... 0.02 OrthoFinder output from all 47 species
GSVIVT01013508001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.01 OrthoFinder output from all 47 species
GSVIVT01013533001 No alias Putative disease resistance RPP13-like protein 1... 0.01 OrthoFinder output from all 47 species
GSVIVT01019349001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.02 OrthoFinder output from all 47 species
GSVIVT01019351001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.04 OrthoFinder output from all 47 species
GSVIVT01022864001 No alias Putative disease resistance protein At3g14460... 0.03 OrthoFinder output from all 47 species
GSVIVT01023011001 No alias Putative disease resistance RPP13-like protein 1... 0.02 OrthoFinder output from all 47 species
GSVIVT01023320001 ZAR1 Putative disease resistance RPP13-like protein 1... 0.01 OrthoFinder output from all 47 species
GSVIVT01032169001 No alias Putative disease resistance RPP13-like protein 1... 0.02 OrthoFinder output from all 47 species
GSVIVT01036657001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01038298001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os03g20840.1 LOC_Os03g20840 Putative disease resistance protein RGA4 OS=Solanum... 0.04 OrthoFinder output from all 47 species
LOC_Os08g43050.1 LOC_Os08g43050 Putative disease resistance protein RGA1 OS=Solanum... 0.03 OrthoFinder output from all 47 species
LOC_Os12g32680.1 LOC_Os12g32680 Disease resistance protein RGA2 OS=Solanum bulbocastanum... 0.01 OrthoFinder output from all 47 species
Zm00001e031999_P001 Zm00001e031999 Putative disease resistance protein RGA3 OS=Solanum... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP HCCA
MF GO:0005347 ATP transmembrane transporter activity IEP HCCA
MF GO:0005471 ATP:ADP antiporter activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0015215 nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015217 ADP transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 181 419
IPR041118 Rx_N 14 98
No external refs found!