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  5. LOC_Os10g08280.1

LOC_Os10g08280.1 (LOC_Os10g08280)


Aliases : LOC_Os10g08280

Description : no description available(sp|q65xs5|bc10_orysj : 134.0)


Gene families : OG0000231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g08280.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00180800 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G10880 No alias Core-2/I-branching... 0.05 OrthoFinder output from all 47 species
AT3G21310 No alias Core-2/I-branching... 0.02 OrthoFinder output from all 47 species
AT4G32290 No alias Core-2/I-branching... 0.04 OrthoFinder output from all 47 species
AT5G16170 No alias Core-2/I-branching... 0.02 OrthoFinder output from all 47 species
AT5G25330 No alias Core-2/I-branching... 0.05 OrthoFinder output from all 47 species
AT5G25970 No alias Core-2/I-branching... 0.02 OrthoFinder output from all 47 species
Aev_g16602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09253 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12452 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene60447.t1 Aspi01Gene60447 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70120.t1 Aspi01Gene70120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g76791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G049800.1 Ceric.18G049800 not classified & original description: pacid=50621711... 0.05 OrthoFinder output from all 47 species
Dcu_g45847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008319001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01011858001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01011861001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01031004001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01032427001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g22160.1 LOC_Os02g22160 no description available(sp|q65xs5|bc10_orysj : 129.0) 0.04 OrthoFinder output from all 47 species
LOC_Os12g42420.1 LOC_Os12g42420 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Lfl_g07289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_112910g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_112910g0020 No alias no description available(sp|q65xs5|bc10_orysj : 127.0) 0.06 OrthoFinder output from all 47 species
MA_66615g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp8g12770.1 No alias no description available(sp|q65xs5|bc10_orysj : 176.0) 0.02 OrthoFinder output from all 47 species
Pnu_g32530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c6_8790V3.1 Pp3c6_8790 Core-2/I-branching... 0.02 OrthoFinder output from all 47 species
Ppi_g60829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g006470.2.1 Solyc11g006470 no description available(sp|q65xs5|bc10_orysj : 96.7) 0.01 OrthoFinder output from all 47 species
Tin_g09483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003261_P001 Zm00001e003261 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e014285_P001 Zm00001e014285 no description available(sp|q65xs5|bc10_orysj : 122.0) 0.03 OrthoFinder output from all 47 species
Zm00001e017004_P001 Zm00001e017004 no description available(sp|q65xs5|bc10_orysj : 133.0) 0.1 OrthoFinder output from all 47 species
Zm00001e017911_P002 Zm00001e017911 no description available(sp|q65xs5|bc10_orysj : 157.0) 0.02 OrthoFinder output from all 47 species
Zm00001e024826_P001 Zm00001e024826 no description available(sp|q65xs5|bc10_orysj : 127.0) 0.02 OrthoFinder output from all 47 species
Zm00001e025751_P001 Zm00001e025751 no description available(sp|q65xs5|bc10_orysj : 124.0) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 130 361
No external refs found!