Aliases : CLPP1, PCLPP, LOC_Os10g21300
Description : ATP-dependent Clp protease proteolytic subunit OS=Oryza nivara (sp|q6ene9|clpp_oryni : 439.0) & Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 328.2)
Gene families : OG0005638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005638_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00072p00125230 | evm_27.TU.AmTr_v1... | ATP-dependent Clp protease proteolytic subunit... | 0.14 | OrthoFinder output from all 47 species | |
| ATCG00670 | CLPP1, PCLPP | plastid-encoded CLP P | 0.15 | OrthoFinder output from all 47 species | |
| Aev_g08306 | CLPP1, PCLPP | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.22 | OrthoFinder output from all 47 species | |
| Als_g53570 | CLPP1, PCLPP | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.1 | OrthoFinder output from all 47 species | |
| Aob_g33780 | CLPP1, PCLPP | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.15 | OrthoFinder output from all 47 species | |
| Cba_g08794 | CLPP1, PCLPP | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.13 | OrthoFinder output from all 47 species | |
| Ceric.05G041300.1 | CLPP1, PCLPP,... | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.18 | OrthoFinder output from all 47 species | |
| Ceric.05G051000.1 | CLPP1, PCLPP,... | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.1 | OrthoFinder output from all 47 species | |
| Ceric.17G015900.1 | CLPP1, PCLPP,... | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.19G010300.1 | CLPP1, PCLPP,... | not classified & original description: pacid=50576599... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.1Z021300.1 | CLPP1, PCLPP,... | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.16 | OrthoFinder output from all 47 species | |
| Ceric.1Z162700.1 | CLPP1, PCLPP,... | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.38G007900.1 | CLPP1, PCLPP,... | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.18 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020563.155 | CLPP1, PCLPP | Protein degradation.peptidase families.serine-type... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g08455 | CLPP1, PCLPP | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g39712.1 | CLPP1, PCLPP,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.14 | OrthoFinder output from all 47 species | |
| Lfl_g19263 | CLPP1, PCLPP | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.14 | OrthoFinder output from all 47 species | |
| Mpzg01030.3 | CLPP1, PCLPP | proteolytic core component ClpP1/3-6 of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g10955 | CLPP1, PCLPP | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g40632 | CLPP1, PCLPP | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.08 | OrthoFinder output from all 47 species | |
| Pir_g07483 | CLPP1, PCLPP | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.1 | OrthoFinder output from all 47 species | |
| Pnu_g10170 | CLPP1, PCLPP | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.08 | OrthoFinder output from all 47 species | |
| Ppi_g33472 | CLPP1, PCLPP | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g03253 | No alias | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.08 | OrthoFinder output from all 47 species | |
| Smo137715 | CLPP1, PCLPP | Protein degradation.peptidase families.serine-type... | 0.15 | OrthoFinder output from all 47 species | |
| Solyc00g500023.1.1 | CLPP1, PCLPP,... | ATP-dependent Clp protease proteolytic subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc00g500070.1.1 | CLPP1, PCLPP,... | ATP-dependent Clp protease proteolytic subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05341 | CLPP1, PCLPP | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g09204 | CLPP1, PCLPP | EC_3.4 hydrolase acTing on peptide bond (peptidase) &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e042085_P001 | CLPP1, PCLPP,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| CC | GO:0009579 | thylakoid | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023562 | ClpP/TepA | 17 | 195 |
| No external refs found! |
