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  5. LOC_Os10g22600.1

LOC_Os10g22600.1 (LOC_Os10g22600)


Aliases : LOC_Os10g22600

Description : transcription factor (DREB)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g22600.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00185480 ERF-1, ATERF-1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
AMTR_s00026p00180130 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor ERF084... 0.01 OrthoFinder output from all 47 species
AMTR_s00039p00088760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
AMTR_s00058p00066390 RAP2.11,... External stimuli response.biotic... 0.01 OrthoFinder output from all 47 species
AMTR_s00095p00096190 CBF4, DREB1D,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
AT2G36450 HRD Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.02 OrthoFinder output from all 47 species
AT5G11590 TINY2 Integrase-type DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G43410 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Gb_06962 ERF72, EBP, ATEBP, RAP2.3 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Gb_19320 RAP2.12 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_32995 No alias Ethylene-responsive transcription factor ERF016... 0.01 OrthoFinder output from all 47 species
Gb_41433 No alias transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
LOC_Os01g21120.1 HRE2, LOC_Os01g21120 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
LOC_Os02g43820.1 ERF5, ATERF-5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g08460.1 RAP2.12, LOC_Os03g08460 Ethylene-responsive transcription factor ERF073... 0.01 OrthoFinder output from all 47 species
LOC_Os03g64260.1 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os05g36100.1 ERF110, LOC_Os05g36100 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os06g07030.1 RAP2.9, DEAR5,... transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
LOC_Os06g10780.1 LOC_Os06g10780 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
LOC_Os08g45110.1 LOC_Os08g45110 transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
LOC_Os09g11480.2 RAP2.2, LOC_Os09g11480 Ethylene-responsive transcription factor ERF112... 0.03 OrthoFinder output from all 47 species
MA_10274g0010 Rap2.6L transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_168025g0010 ERF110 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
MA_179692g0020 ERF-1, ATERF-1 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
MA_364562g0010 No alias transcription factor (DREB) 0.17 OrthoFinder output from all 47 species
MA_436575g0010 TINY2 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Solyc01g090340.3.1 ATERF13, ERF13,... Ethylene-responsive transcription factor 13... 0.05 OrthoFinder output from all 47 species
Solyc01g090370.3.1 ATERF13, ERF13,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc03g116610.3.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Solyc03g118190.4.1 Solyc03g118190 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc06g063070.3.1 RAP2.12, Solyc06g063070 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Solyc06g068830.2.1 Solyc06g068830 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc08g008305.1.1 Solyc08g008305 transcription factor (DREB) 0.09 OrthoFinder output from all 47 species
Solyc08g078180.1.1 ERF2, ATERF2,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc09g089910.1.1 Solyc09g089910 transcription factor (ERF). transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Solyc09g089930.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Zm00001e000400_P001 Zm00001e000400 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e021331_P001 ORA59, Zm00001e021331 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e022016_P001 Zm00001e022016 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e026573_P001 Zm00001e026573 transcription factor (DREB) 0.06 OrthoFinder output from all 47 species
Zm00001e030090_P001 DEAR3, Zm00001e030090 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e033537_P001 ERF1, ATERF1,... transcription factor (ERF) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 124 172
No external refs found!