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  5. LOC_Os10g22700.1

LOC_Os10g22700.1 (LOC_Os10g22700)


Aliases : LOC_Os10g22700

Description : AAA-ATPase At3g50940 OS=Arabidopsis thaliana (sp|q147f9|aatpc_arath : 142.0)


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g22700.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00241930 BCS1,... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00019p00244830 AATP1,... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G25835 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
Adi_g031480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115155 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g05390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g32826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36939 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.07G064600.1 Ceric.07G064600 not classified & original description: pacid=50626260... 0.03 OrthoFinder output from all 47 species
Ceric.19G071900.1 Ceric.19G071900 not classified & original description: pacid=50575289... 0.02 OrthoFinder output from all 47 species
Dde_g30746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_34238 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os07g09420.1 LOC_Os07g09420 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os07g09470.1 LOC_Os07g09470 AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10067279g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10436428g0010 No alias AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_161279g0020 No alias AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_28097g0010 BCS1 AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_296237g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_296237g0020 BCS1 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_604139g0010 AATP1 AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Msp_g10169 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g033790.4.1 BCS1, Solyc03g033790 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e004348_P001 Zm00001e004348 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e020637_P001 BCS1, Zm00001e020637 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 119 175
No external refs found!