LOC_Os10g25010.1 (CEN2, LOC_Os10g25010)


Aliases : CEN2, LOC_Os10g25010

Description : DNA repair protein (CEN2). centrin component CEN of TREX-2 mRNP trafficking complex


Gene families : OG0001195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001195_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g25010.1

Target Alias Description ECC score Gene Family Method Actions
AT4G37010 CEN2 centrin 2 0.04 OrthoFinder output from all 47 species
Als_g05931 CEN2 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00206 CEN2 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60056.t1 CEN2, Aspi01Gene60056 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g36989 CEN2 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45224 CEN2 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001038 CEN2 calcium sensor *(CML) & original description: CDS=1-501 0.02 OrthoFinder output from all 47 species
Zm00001e012873_P001 CEN2, Zm00001e012873 DNA repair protein (CEN2). centrin component CEN of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 46 108
IPR002048 EF_hand_dom 119 182
No external refs found!