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  5. LOC_Os10g27350.1

LOC_Os10g27350.1 (LOC_Os10g27350)


Aliases : LOC_Os10g27350

Description : no hits & (original description: none)


Gene families : OG0000217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g27350.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00151940 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00148p00028850 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G29640 No alias Protein of unknown function, DUF584 0.03 OrthoFinder output from all 47 species
AT2G28400 No alias Protein of unknown function, DUF584 0.04 OrthoFinder output from all 47 species
AT3G45210 No alias Protein of unknown function, DUF584 0.03 OrthoFinder output from all 47 species
AT4G04630 No alias Protein of unknown function, DUF584 0.04 OrthoFinder output from all 47 species
AT4G18980 AtS40-3 AtS40-3 0.03 OrthoFinder output from all 47 species
AT4G26950 No alias Protein of unknown function, DUF584 0.04 OrthoFinder output from all 47 species
AT5G03230 No alias Protein of unknown function, DUF584 0.02 OrthoFinder output from all 47 species
AT5G60680 No alias Protein of unknown function, DUF584 0.04 OrthoFinder output from all 47 species
Adi_g003804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02883 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g24167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01715 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62379.t1 Aspi01Gene62379 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010657 No alias not classified & original description: CDS=1-753 0.02 OrthoFinder output from all 47 species
Azfi_s0705.g082674 No alias not classified & original description: CDS=1-897 0.02 OrthoFinder output from all 47 species
Cba_g03100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G107400.1 Ceric.02G107400 not classified & original description: pacid=50584750... 0.03 OrthoFinder output from all 47 species
Ceric.21G020100.1 Ceric.21G020100 not classified & original description: pacid=50603989... 0.03 OrthoFinder output from all 47 species
Ceric.29G056400.1 Ceric.29G056400 not classified & original description: pacid=50624938... 0.02 OrthoFinder output from all 47 species
Dac_g11005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025190001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os04g43990.1 LOC_Os04g43990 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g45834.1 LOC_Os04g45834 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g33270.1 LOC_Os07g33270 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g07650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g16906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g28989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434437g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_19374g0040 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_2588g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_5080831g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_54260g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_88194g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g22078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g42452 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18742 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003978 No alias not classified & original description: CDS=1-753 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005504 No alias not classified & original description: CDS=1-846 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017837 No alias not classified & original description: CDS=1-621 0.03 OrthoFinder output from all 47 species
Sam_g04107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g032800.1.1 Solyc02g032800 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc07g064650.3.1 Solyc07g064650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g007790.1.1 Solyc09g007790 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g006275.1.1 Solyc10g006275 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e007566_P001 Zm00001e007566 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e012668_P001 Zm00001e012668 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e015167_P001 Zm00001e015167 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019192_P001 Zm00001e019192 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019921_P001 Zm00001e019921 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035093_P001 Zm00001e035093 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035102_P001 Zm00001e035102 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e039074_P001 Zm00001e039074 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e041249_P001 Zm00001e041249 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 37 252
No external refs found!