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  5. LOC_Os10g29310.1

LOC_Os10g29310.1 (ATBPM2, BPM2, LOC_Os10g29310)


Aliases : ATBPM2, BPM2, LOC_Os10g29310

Description : BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana (sp|q8l765|bpm1_arath : 271.0)


Gene families : OG0000564 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000564_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g29310.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g024011 ATBPM2, BPM2 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Zm00001e005040_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.03 OrthoFinder output from all 47 species
Zm00001e030370_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.02 OrthoFinder output from all 47 species
Zm00001e033378_P002 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 185 294
IPR002083 MATH/TRAF_dom 43 151
No external refs found!