1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os10g30840.1

LOC_Os10g30840.1 (LOC_Os10g30840)


Aliases : LOC_Os10g30840

Description : transcription factor (ERF)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g30840.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.02 OrthoFinder output from all 47 species
Adi_g056044 ERF110 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g41268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12877 CRF3 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37143 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.01 OrthoFinder output from all 47 species
Als_g37382 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene70906.t1 Aspi01Gene70906 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0015.g014119 ATERF8, ATERF-8, ERF8 not classified & original description: CDS=1-357 0.04 OrthoFinder output from all 47 species
Ceric.01G120100.1 HRE2, Ceric.01G120100 transcription factor component *(HRE/RAP2.12) of... 0.05 OrthoFinder output from all 47 species
Ceric.02G053400.1 ERF7, ATERF7,... not classified & original description: pacid=50585332... 0.02 OrthoFinder output from all 47 species
Ceric.02G053500.1 ATERF3, ERF3,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.03G067500.1 AtERF48, DREB2C,... subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.05G034500.1 DEAR2, Ceric.05G034500 not classified & original description: pacid=50578330... 0.02 OrthoFinder output from all 47 species
Ceric.07G001200.1 Ceric.07G001200 not classified & original description: pacid=50626761... 0.02 OrthoFinder output from all 47 species
Ceric.08G023300.1 Ceric.08G023300 not classified & original description: pacid=50638876... 0.02 OrthoFinder output from all 47 species
Ceric.13G085000.1 Ceric.13G085000 subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ceric.13G085200.1 Ceric.13G085200 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.13G085300.1 Ceric.13G085300 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.13G085400.1 Ceric.13G085400 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.15G008100.1 DREB26, Ceric.15G008100 not classified & original description: pacid=50640261... 0.03 OrthoFinder output from all 47 species
Ceric.15G043700.1 HRE2, Ceric.15G043700 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ceric.24G043100.1 DEAR4, RAP2.10,... not classified & original description: pacid=50629256... 0.04 OrthoFinder output from all 47 species
Ceric.28G013900.1 Ceric.28G013900 subgroup ERF-V transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.30G046100.1 RAP2.1, Ceric.30G046100 not classified & original description: pacid=50608854... 0.03 OrthoFinder output from all 47 species
Ceric.30G046200.1 DREB26, Ceric.30G046200 not classified & original description: pacid=50608865... 0.05 OrthoFinder output from all 47 species
Ceric.30G046400.1 RAP2.1, Ceric.30G046400 not classified & original description: pacid=50608761... 0.03 OrthoFinder output from all 47 species
Ceric.30G046500.1 Ceric.30G046500 not classified & original description: pacid=50609571... 0.02 OrthoFinder output from all 47 species
Ceric.31G058400.1 TINY2, Ceric.31G058400 subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ceric.37G041600.1 RAP2.6, Ceric.37G041600 not classified & original description: pacid=50615741... 0.02 OrthoFinder output from all 47 species
Ceric.38G032800.1 DREB26, Ceric.38G032800 not classified & original description: pacid=50580507... 0.04 OrthoFinder output from all 47 species
Dac_g14879 ERF110 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g19647 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37778 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g40206 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g04627 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14596 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19848 RAP2.6 subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_06962 ERF72, EBP, ATEBP, RAP2.3 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Gb_07476 ERF-6-6, ERF6, ATERF6 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_20532 DEAR3 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Gb_24891 RAP2.12 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Gb_26438 HRE1 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Gb_32995 No alias Ethylene-responsive transcription factor ERF016... 0.01 OrthoFinder output from all 47 species
LOC_Os02g13710.1 TINY2, LOC_Os02g13710 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Len_g02969 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g09395 No alias subgroup ERF-X transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
MA_40048g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_4182g0010 Rap2.6L no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp5g02590.1 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Mp7g13760.1 RAP2.4 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Nbi_g00480 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g11267 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g20447 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Pir_g23562 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10709 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11378 TINY2 subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015276 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Zm00001e004208_P001 Zm00001e004208 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Zm00001e023078_P001 Zm00001e023078 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e023149_P001 ERF5, ATERF-5,... transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Zm00001e032483_P001 Zm00001e032483 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 11 62
No external refs found!