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  5. LOC_Os10g37830.1

LOC_Os10g37830.1 (AtPP2-A13, PP2-A13,...)


Aliases : AtPP2-A13, PP2-A13, LOC_Os10g37830

Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g37830.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AT2G02230 AtPP2-B1, PP2-B1 phloem protein 2-B1 0.03 OrthoFinder output from all 47 species
AT3G61060 AtPP2-A13, PP2-A13 phloem protein 2-A13 0.02 OrthoFinder output from all 47 species
Azfi_s0229.g059124 No alias not classified & original description: CDS=133-1170 0.06 OrthoFinder output from all 47 species
Dac_g17614 MEE66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g41000 AtPP2-A13, PP2-A13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g017960.2.1 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR025886 PP2-like 136 294
No external refs found!