LOC_Os10g39210.1 (LOC_Os10g39210)


Aliases : LOC_Os10g39210

Description : Heavy metal-associated isoprenylated plant protein 30 OS=Arabidopsis thaliana (sp|f4iqg4|hip30_arath : 145.0)


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g39210.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00268350 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 37... 0.04 OrthoFinder output from all 47 species
AMTR_s00034p00190630 NAKR2,... Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT3G48970 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G56240 CCH copper chaperone 0.03 OrthoFinder output from all 47 species
AT5G37860 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G66110 HIPP27 Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g040832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g080330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g093023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08721 HIPP20 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07856 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08492 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11434 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39287 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38515 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g50558 NAKR1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene16661.t1 Aspi01Gene16661 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65660.t1 Aspi01Gene65660 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g46375 HIPP20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G002900.1 Ceric.07G002900 not classified & original description: pacid=50626153... 0.03 OrthoFinder output from all 47 species
Ceric.24G019500.1 Ceric.24G019500 not classified & original description: pacid=50629311... 0.03 OrthoFinder output from all 47 species
Dac_g12205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21643 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28851 NAKR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018723001 HIPP27 Heavy metal-associated isoprenylated plant protein 27... 0.03 OrthoFinder output from all 47 species
GSVIVT01018725001 HIPP27 Heavy metal-associated isoprenylated plant protein 27... 0.03 OrthoFinder output from all 47 species
GSVIVT01025049001 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01027966001 No alias Heavy metal-associated isoprenylated plant protein 36... 0.07 OrthoFinder output from all 47 species
GSVIVT01030883001 HIPP21 Heavy metal-associated isoprenylated plant protein 21... 0.04 OrthoFinder output from all 47 species
Gb_20919 No alias Heavy metal-associated isoprenylated plant protein 23... 0.02 OrthoFinder output from all 47 species
Gb_20922 No alias Heavy metal-associated isoprenylated plant protein 23... 0.03 OrthoFinder output from all 47 species
Gb_21296 No alias Heavy metal-associated isoprenylated plant protein 30... 0.03 OrthoFinder output from all 47 species
Gb_39768 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g41200.1 LOC_Os01g41200 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g40130.1 LOC_Os08g40130 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g02639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17429 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_131067g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp2g01720.1 ATX1, ATATX1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g01760.1 ATX1, ATATX1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g01770.1 ATX1, ATATX1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g01790.1 ATX1, ATATX1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g01820.1 ATX1, ATATX1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g12480.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp5g20370.1 No alias copper chaperone (CCH) 0.04 OrthoFinder output from all 47 species
Msp_g00266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08746 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g45463 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g45834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022933 No alias not classified & original description: CDS=131-1195 0.04 OrthoFinder output from all 47 species
Sam_g36889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g105000.3.1 Solyc01g105000 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc02g076880.4.1 Solyc02g076880 Heavy metal-associated isoprenylated plant protein 28... 0.04 OrthoFinder output from all 47 species
Spa_g10482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003565_P001 Zm00001e003565 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e004204_P001 Zm00001e004204 Heavy metal-associated isoprenylated plant protein 23... 0.03 OrthoFinder output from all 47 species
Zm00001e027825_P001 Zm00001e027825 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e028833_P001 Zm00001e028833 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006121 HMA_dom 58 113
No external refs found!