LOC_Os10g39700.1 (HCHIB, B-CHI,...)

Aliases : HCHIB, B-CHI, ATHCHIB, PR-3, PR3, CHI-B, LOC_Os10g39700

Description : Chitinase 8 OS=Oryza sativa subsp. japonica (sp|q7xck6|chi8_orysj : 227.0)

Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os10g39700.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00243300	HCHIB, B-CHI,...	Endochitinase A2 OS=Pisum sativum	0.01	OrthoFinder output from all 47 species
AMTR_s00001p00243570	HCHIB, B-CHI,...	Basic 30 kDa endochitinase OS=Solanum lycopersicum	0.03	OrthoFinder output from all 47 species
AMTR_s00001p00243680	HCHIB, B-CHI,...	Chitinase 3 OS=Oryza sativa subsp. japonica	0.01	OrthoFinder output from all 47 species
AMTR_s00001p00243780	HCHIB, B-CHI,...	Endochitinase A2 OS=Pisum sativum	0.02	OrthoFinder output from all 47 species
AMTR_s00066p00199730	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT2G43570	CHI	chitinase, putative	0.01	OrthoFinder output from all 47 species
AT2G43580	No alias	Chitinase family protein	0.1	OrthoFinder output from all 47 species
AT2G43610	No alias	Chitinase family protein	0.02	OrthoFinder output from all 47 species
AT2G43620	No alias	Chitinase family protein	0.03	OrthoFinder output from all 47 species
AT3G47540	No alias	Chitinase family protein	0.01	OrthoFinder output from all 47 species
AT3G54420	ATEP3, EP3,...	homolog of carrot EP3-3 chitinase	0.02	OrthoFinder output from all 47 species
AT4G01700	No alias	Chitinase family protein	0.03	OrthoFinder output from all 47 species
Als_g36519	HCHIB, B-CHI,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene32099.t1	HCHIB, B-CHI,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene32113.t1	ATEP3, EP3,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene32150.t1	HCHIB, B-CHI,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0001.g000759	No alias	not classified & original description: CDS=1-276	0.05	OrthoFinder output from all 47 species
Azfi_s0001.g000760	HCHIB, B-CHI,...	not classified & original description: CDS=115-894	0.03	OrthoFinder output from all 47 species
Ehy_g23248	HCHIB, B-CHI,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01038111001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01038120001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_03375	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
Gb_03376	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.01	OrthoFinder output from all 47 species
Gb_20314	ATEP3, EP3,...	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
LOC_Os03g04060.1	LOC_Os03g04060	Chitinase 11 OS=Oryza sativa subsp. japonica...	0.01	OrthoFinder output from all 47 species
LOC_Os06g51050.1	HCHIB, B-CHI,...	Chitinase 3 OS=Oryza sativa subsp. japonica...	0.01	OrthoFinder output from all 47 species
LOC_Os06g51060.1	HCHIB, B-CHI,...	Chitinase 1 OS=Oryza sativa subsp. japonica...	0.01	OrthoFinder output from all 47 species
LOC_Os10g39680.1	HCHIB, B-CHI,...	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.01	OrthoFinder output from all 47 species
MA_10425967g0010	HCHIB, B-CHI,...	Basic endochitinase OS=Vitis vinifera...	0.02	OrthoFinder output from all 47 species
MA_10430424g0010	ATEP3, EP3,...	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
MA_381956g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_8960362g0010	HCHIB, B-CHI,...	Endochitinase 1 OS=Theobroma cacao (sp\|q41596\|chi1_thecc : 81.6)	0.05	OrthoFinder output from all 47 species
MA_9682123g0010	ATEP3, EP3,...	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Mp4g01780.1	HCHIB, B-CHI,...	Endochitinase CH5B OS=Phaseolus vulgaris...	0.03	OrthoFinder output from all 47 species
Mp4g20470.1	HCHIB, B-CHI,...	Basic endochitinase B OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008764	ATEP3, EP3,...	not classified & original description: CDS=1-579	0.02	OrthoFinder output from all 47 species
Sam_g31038	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g082930.3.1	HCHIB, B-CHI,...	Acidic 27 kDa endochitinase OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
Solyc04g072000.4.1	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Zm00001e002252_P001	HCHIB, B-CHI,...	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.01	OrthoFinder output from all 47 species
Zm00001e015056_P001	ATEP3, EP3,...	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Zm00001e027534_P001	Zm00001e027534	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
Zm00001e030151_P001	HCHIB, B-CHI,...	Chitinase 1 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Zm00001e030152_P001	HCHIB, B-CHI,...	Basic endochitinase A OS=Secale cereale...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	38	161

External Links

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LOC_Os10g39700.1 (HCHIB, B-CHI,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation