LOC_Os10g42670.1 (XTH29, LOC_Os10g42670)


Aliases : XTH29, LOC_Os10g42670

Description : Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana (sp|q38908|xth30_arath : 294.0) & Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase(50.2.4 : 172.2)


Gene families : OG0000942 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000942_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g42670.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00167480 XTH32,... Enzyme classification.EC_2 transferases.EC_2.4... 0.04 OrthoFinder output from all 47 species
AMTR_s00024p00025540 EXGT-A2, XTH28,... Enzyme classification.EC_2 transferases.EC_2.4... 0.03 OrthoFinder output from all 47 species
AT2G01850 XTH27, ATXTH27, EXGT-A3 endoxyloglucan transferase A3 0.03 OrthoFinder output from all 47 species
Aspi01Gene42564.t1 EXGT-A2, XTH28,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G005800.1 EXGT-A2, XTH28,... EC_2.4 glycosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g30891 XTH27, ATXTH27, EXGT-A3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013055001 XTR4, XTH30 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Gb_32543 XTH32 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Len_g21376 XTH27, ATXTH27, EXGT-A3 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12480 XTR4, XTH30 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g005680.3.1 XET, XTH33,... Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Spa_g10261 XTR4, XTH30 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000070_P001 XTH32, Zm00001e000070 xyloglucan endotransglucosylase/hydrolase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
CC GO:0005618 cell wall IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
BP GO:0006073 cellular glucan metabolic process IEA Interproscan
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA Interproscan
CC GO:0048046 apoplast IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010713 XET_C 247 286
IPR000757 GH16 50 214
No external refs found!