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  5. LOC_Os10g42850.1

LOC_Os10g42850.1 (MEE24, AtWRKY35,...)


Aliases : MEE24, AtWRKY35, WRKY35, LOC_Os10g42850

Description : transcription factor (WRKY)


Gene families : OG0000132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g42850.1
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00025460 WRKY22,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
AMTR_s00130p00044000 ATWRKY65,... RNA biosynthesis.transcriptional activation.WRKY... 0.05 OrthoFinder output from all 47 species
AT1G29280 ATWRKY65, WRKY65 WRKY DNA-binding protein 65 0.03 OrthoFinder output from all 47 species
AT1G30650 WRKY14, AR411, ATWRKY14 WRKY DNA-binding protein 14 0.03 OrthoFinder output from all 47 species
AT3G58710 ATWRKY69, WRKY69 WRKY DNA-binding protein 69 0.04 OrthoFinder output from all 47 species
Adi_g056223 WRKY21 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058782 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g058783 WRKY14, AR411, ATWRKY14 WRKY-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g082561 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06690 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40188 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g42336 WRKY21 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10173 WRKY14, AR411, ATWRKY14 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06206 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38365.t1 WRKY14, AR411,... WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53268.t1 WRKY74,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58184.t1 WRKY74,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71919.t2 MEE24, AtWRKY35,... WRKY-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0006.g010291 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0028.g023846 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0501.g073873 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: CDS=1-1413 0.05 OrthoFinder output from all 47 species
Cba_g22948 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G043200.1 WRKY21, Ceric.07G043200 WRKY-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.10G040600.1 MEE24, AtWRKY35,... WRKY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.22G047500.1 WRKY21, Ceric.22G047500 WRKY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g09758 WRKY21 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33186 WRKY14, AR411, ATWRKY14 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51390 ATWRKY11, WRKY11 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24172 WRKY21 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11221 WRKY21 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021252001 ATWRKY65, WRKY65 RNA biosynthesis.transcriptional activation.WRKY... 0.05 OrthoFinder output from all 47 species
GSVIVT01021765001 WRKY14, AR411, ATWRKY14 RNA biosynthesis.transcriptional activation.WRKY... 0.07 OrthoFinder output from all 47 species
GSVIVT01026965001 WRKY22, AtWRKY22 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
GSVIVT01028823001 ATWRKY27, WRKY27 RNA biosynthesis.transcriptional activation.WRKY... 0.04 OrthoFinder output from all 47 species
GSVIVT01036223001 WRKY74, ATWRKY74 RNA biosynthesis.transcriptional activation.WRKY... 0.06 OrthoFinder output from all 47 species
Gb_03346 WRKY14, AR411, ATWRKY14 transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
LOC_Os01g53040.1 ATWRKY65,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
LOC_Os02g16540.1 ATWRKY27,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
LOC_Os02g47060.1 MEE24, AtWRKY35,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
LOC_Os05g03900.2 ATWRKY65,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Len_g18531 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43656 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21296 ATWRKY7, WRKY7 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432914g0010 MEE24, AtWRKY35, WRKY35 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
MA_10436931g0040 ATWRKY11, WRKY11 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_109104g0010 MEE24, AtWRKY35, WRKY35 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
MA_124797g0010 ATWRKY65, WRKY65 transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
MA_136551g0010 ATWRKY65, WRKY65 transcription factor (WRKY) 0.06 OrthoFinder output from all 47 species
MA_31009g0010 ATWRKY11, WRKY11 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_38938g0010 MEE24, AtWRKY35, WRKY35 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Msp_g11753 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01072 WRKY21 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02778 WRKY21 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02919 WRKY17, ATWRKY17 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18503 ATWRKY11, WRKY11 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32454 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06116 WRKY21 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08013 ATWRKY7, WRKY7 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20334 WRKY21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g28771 WRKY21 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31609 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33144 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014341 ATWRKY7, WRKY7 WRKY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0302.g027199 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Sam_g09774 No alias WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09775 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo147026 ATWRKY11, WRKY11 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
Solyc01g079360.4.1 MEE24, AtWRKY35,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Solyc01g095100.4.1 WRKY22,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Solyc04g078550.3.1 ATWRKY7, WRKY7,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Solyc08g081610.4.1 ATWRKY29,... transcription factor (WRKY) 0.06 OrthoFinder output from all 47 species
Solyc10g007970.2.1 ATWRKY65,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Spa_g10074 WRKY21 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24251 WRKY14, AR411, ATWRKY14 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37838 ATWRKY65, WRKY65 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39156 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35274 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002502_P001 MEE24, AtWRKY35,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Zm00001e006014_P001 ATWRKY7, WRKY7,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Zm00001e007070_P001 MEE24, AtWRKY35,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e015531_P001 WRKY14, AR411,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Zm00001e019908_P001 ATWRKY69,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Zm00001e023305_P002 WRKY14, AR411,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e026629_P001 MEE24, AtWRKY35,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR003657 WRKY_dom 153 210
No external refs found!