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  5. LOC_Os11g05520.1

LOC_Os11g05520.1 (CAH1, ACA1, ATACA1,...)


Aliases : CAH1, ACA1, ATACA1, LOC_Os11g05520

Description : Alpha carbonic anhydrase 1, chloroplastic OS=Arabidopsis thaliana (sp|o04846|atca1_arath : 154.0) & Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase(50.4.2 : 60.9)


Gene families : OG0000437 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g05520.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00113450 CAH1, ACA1,... Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase 0.11 OrthoFinder output from all 47 species
AT4G20990 ACA4, ATACA4 alpha carbonic anhydrase 4 0.03 OrthoFinder output from all 47 species
AT4G21000 ATACA6, ACA6 alpha carbonic anhydrase 6 0.03 OrthoFinder output from all 47 species
AT5G04180 ATACA3, ACA3 alpha carbonic anhydrase 3 0.03 OrthoFinder output from all 47 species
Aev_g12622 ATACA2, ACA2 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25139 ATACA7, ACA7 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42581.t2 ATACA2, ACA2,... EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42584.t2 ATACA2, ACA2,... EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45278.t1 ATACA7, ACA7,... EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45371.t1 ATACA7, ACA7,... EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033673001 ATACA7, ACA7 Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os12g05730.1 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_100242g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g17100.1 ACA4, ATACA4 Alpha carbonic anhydrase 4 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp6g14480.1 ATACA7, ACA7 Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp8g11360.1 CAH1, ACA1, ATACA1 Alpha carbonic anhydrase 1, chloroplastic OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Nbi_g11049 ATACA6, ACA6 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42746 ATACA2, ACA2 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48621 ATACA7, ACA7 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46845 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g075050.2.1 ATACA7, ACA7,... Bifunctional monodehydroascorbate reductase and carbonic... 0.02 OrthoFinder output from all 47 species
Solyc10g079270.3.1 ACA4, ATACA4,... Alpha carbonic anhydrase 4 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Solyc10g083890.2.1 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc11g069640.2.1 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g03421 ATACA7, ACA7 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008197_P001 CAH1, ACA1,... Alpha carbonic anhydrase 1, chloroplastic OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Zm00001e009137_P001 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
Zm00001e009910_P003 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Zm00001e024146_P002 ATACA7, ACA7,... Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001148 CA_dom 20 169
No external refs found!