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  5. LOC_Os11g11600.1

LOC_Os11g11600.1 (ATGRAS2, SCL14,...)


Aliases : ATGRAS2, SCL14, GRAS2, LOC_Os11g11600

Description : transcription factor (GRAS)


Gene families : OG0000181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g11600.1

Target Alias Description ECC score Gene Family Method Actions
Dac_g20310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03966 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g20490.1 ATGRAS2, SCL14, GRAS2 transcription factor (GRAS) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 3 120
No external refs found!