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  5. LOC_Os11g13510.1

LOC_Os11g13510.1 (RPM1, RPS3, LOC_Os11g13510)


Aliases : RPM1, RPS3, LOC_Os11g13510

Description : no description available(sp|f7j0n2|rga5r_orysj : 243.0)


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g13510.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00165330 RPM1, RPS3,... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00061p00205330 evm_27.TU.AmTr_v1... Probable disease resistance RPP8-like protein 2... 0.02 OrthoFinder output from all 47 species
AT3G46530 RPP13 NB-ARC domain-containing disease resistance protein 0.06 OrthoFinder output from all 47 species
AT5G35450 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
GSVIVT01018564001 No alias Putative disease resistance RPP13-like protein 3... 0.03 OrthoFinder output from all 47 species
LOC_Os06g48520.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os08g29854.1 LOC_Os08g29854 no description available(sp|q2r8l1|rga5s_orysj : 340.0) 0.07 OrthoFinder output from all 47 species
LOC_Os08g31800.1 LOC_Os08g31800 no description available(sp|q2r8l1|rga5s_orysj : 394.0) 0.04 OrthoFinder output from all 47 species
LOC_Os11g16510.1 LOC_Os11g16510 no description available(sp|p0do08|pikm2_orysj : 87.0) 0.03 OrthoFinder output from all 47 species
LOC_Os11g41170.1 LOC_Os11g41170 no description available(sp|p0do08|pikm2_orysj : 199.0) 0.04 OrthoFinder output from all 47 species
LOC_Os11g41210.1 LOC_Os11g41210 no description available(sp|q2r8l1|rga5s_orysj : 81.6) 0.03 OrthoFinder output from all 47 species
LOC_Os12g28040.1 LOC_Os12g28040 no description available(sp|f7j0n2|rga5r_orysj : 317.0) 0.08 OrthoFinder output from all 47 species
Solyc04g009690.2.1 RPP13, Solyc04g009690 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e008806_P001 Zm00001e008806 no description available(sp|q2r8l1|rga5s_orysj : 238.0) 0.02 OrthoFinder output from all 47 species
Zm00001e015744_P001 Zm00001e015744 no description available(sp|q2r8l1|rga5s_orysj : 372.0) 0.07 OrthoFinder output from all 47 species
Zm00001e024479_P001 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e039751_P001 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR041118 Rx_N 16 104
IPR002182 NB-ARC 198 425
No external refs found!