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  5. LOC_Os11g17330.1

LOC_Os11g17330.1 (LOC_Os11g17330)


Aliases : LOC_Os11g17330

Description : no description available(sp|q2r8l1|rga5s_orysj : 391.0)


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g17330.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00245940 evm_27.TU.AmTr_v1... Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00088p00054890 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00088p00057720 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00090p00137350 RPP13,... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G10920 LOV1 NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G58400 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G58410 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G59780 No alias NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT3G07040 RPM1, RPS3 NB-ARC domain-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.05 OrthoFinder output from all 47 species
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.04 OrthoFinder output from all 47 species
Adi_g065170 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01012168001 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01024096001 No alias Putative disease resistance protein At1g59780... 0.03 OrthoFinder output from all 47 species
GSVIVT01024101001 RPP13 Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01026725001 No alias Putative disease resistance protein At1g50180... 0.03 OrthoFinder output from all 47 species
GSVIVT01026728001 No alias Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01026745001 No alias Putative disease resistance protein At1g50180... 0.02 OrthoFinder output from all 47 species
GSVIVT01026750001 HRT, RCY1, RPP8 Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g09790.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g35210.1 LOC_Os02g35210 no description available(sp|q2r8l1|rga5s_orysj : 458.0) 0.01 OrthoFinder output from all 47 species
LOC_Os04g02860.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g11760.1 LOC_Os04g11760 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os04g11780.1 LOC_Os04g11780 no description available(sp|f7j0n2|rga5r_orysj : 115.0) 0.06 OrthoFinder output from all 47 species
LOC_Os06g22460.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g07920.1 LOC_Os08g07920 no description available(sp|q2qzf1|pik6_orysj : 119.0) 0.06 OrthoFinder output from all 47 species
LOC_Os08g14800.1 LOC_Os08g14800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g31780.1 RPM1, RPS3,... no description available(sp|q2r8l1|rga5s_orysj : 415.0) 0.04 OrthoFinder output from all 47 species
LOC_Os09g09750.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os10g03570.1 LOC_Os10g03570 no description available(sp|q2r8l1|rga5s_orysj : 283.0) 0.04 OrthoFinder output from all 47 species
LOC_Os10g04342.1 LOC_Os10g04342 no description available(sp|q2qzf1|pik6_orysj : 126.0) 0.04 OrthoFinder output from all 47 species
LOC_Os11g11950.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os11g12050.2 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g12340.2 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g12350.1 LOC_Os11g12350 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os11g16510.1 LOC_Os11g16510 no description available(sp|p0do08|pikm2_orysj : 87.0) 0.04 OrthoFinder output from all 47 species
LOC_Os11g16530.2 HRT, RCY1, RPP8,... no description available(sp|f7j0n2|rga5r_orysj : 285.0) 0.03 OrthoFinder output from all 47 species
LOC_Os11g41170.1 LOC_Os11g41170 no description available(sp|p0do08|pikm2_orysj : 199.0) 0.04 OrthoFinder output from all 47 species
LOC_Os11g41210.1 LOC_Os11g41210 no description available(sp|q2r8l1|rga5s_orysj : 81.6) 0.07 OrthoFinder output from all 47 species
LOC_Os12g17420.1 RPM1, RPS3,... no description available(sp|q2r8l1|rga5s_orysj : 165.0) 0.04 OrthoFinder output from all 47 species
LOC_Os12g17480.1 LOC_Os12g17480 no description available(sp|q2r8l1|rga5s_orysj : 343.0) 0.05 OrthoFinder output from all 47 species
LOC_Os12g17490.1 RPM1, RPS3,... no description available(sp|p0do08|pikm2_orysj : 309.0) 0.01 OrthoFinder output from all 47 species
LOC_Os12g29280.1 LOC_Os12g29280 Putative disease resistance protein RGA1 OS=Solanum... 0.06 OrthoFinder output from all 47 species
LOC_Os12g37760.1 LOC_Os12g37760 no description available(sp|p0do08|pikm2_orysj : 370.0) 0.03 OrthoFinder output from all 47 species
Solyc03g005670.3.1 Solyc03g005670 Disease resistance RPP8-like protein 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc04g009690.2.1 RPP13, Solyc04g009690 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g025820.1.1 RPP13, Solyc04g025820 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e011093_P001 ZAR1, Zm00001e011093 no description available(sp|f7j0n2|rga5r_orysj : 358.0) 0.02 OrthoFinder output from all 47 species
Zm00001e011354_P001 Zm00001e011354 no description available(sp|p0do08|pikm2_orysj : 121.0) 0.03 OrthoFinder output from all 47 species
Zm00001e024479_P001 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e029265_P001 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e039751_P001 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 191 421
IPR041118 Rx_N 12 97
No external refs found!