LOC_Os11g19030.1 (LOC_Os11g19030)

Aliases : LOC_Os11g19030

Description : transcription factor (FAR1)

Gene families : OG0013051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013051_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os11g19030.1
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os03g41750.1	LOC_Os03g41750	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species
LOC_Os05g20320.1	LOC_Os05g20320	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os06g28170.1	LOC_Os06g28170	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
LOC_Os07g06770.1	LOC_Os07g06770	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os08g27250.1	LOC_Os08g27250	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os10g06910.1	LOC_Os10g06910	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003653	Peptidase_C48_C	651	750
IPR004330	FAR1_DNA_bnd_dom	787	853

External Links

No external refs found!