LOC_Os11g24780.1 (LOC_Os11g24780)


Aliases : LOC_Os11g24780

Description : no hits & (original description: none)


Gene families : OG0010957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010957_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g24780.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g34820.1 LOC_Os07g34820 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g16550.1 LOC_Os09g16550 Ankyrin repeat-containing protein At5g02620... 0.01 OrthoFinder output from all 47 species
LOC_Os11g07980.1 LOC_Os11g07980 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g24750.1 LOC_Os11g24750 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pp3c24_12640V3.1 Pp3c24_12640 ankyrin repeat family protein 0.01 OrthoFinder output from all 47 species
Zm00001e008991_P001 Zm00001e008991 Ankyrin repeat-containing protein At2g01680... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 223 314
IPR020683 DUF3447 23 127
IPR026961 PGG_dom 439 544
No external refs found!