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  5. LOC_Os11g25020.1

LOC_Os11g25020.1 (LOC_Os11g25020)


Aliases : LOC_Os11g25020

Description : no hits & (original description: none)


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g25020.1
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269120 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AMTR_s00012p00212610 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00099p00034070 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G77145 No alias Protein of unknown function (DUF506) 0.03 OrthoFinder output from all 47 species
AT2G39650 No alias Protein of unknown function (DUF506) 0.02 OrthoFinder output from all 47 species
AT3G25240 No alias Protein of unknown function (DUF506) 0.03 OrthoFinder output from all 47 species
Adi_g023073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113655 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g16981 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15434 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G086500.1 Ceric.01G086500 not classified & original description: pacid=50591937... 0.03 OrthoFinder output from all 47 species
Ceric.01G087300.1 Ceric.01G087300 not classified & original description: pacid=50591762... 0.04 OrthoFinder output from all 47 species
Dcu_g12512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g43811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01006248001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01030534001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01036397001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_28132 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_30160 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_36122 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g02311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g24146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29070 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10117499g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10428193g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_279654g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_29449g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_373131g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g06137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g34113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15663 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003040 No alias not classified & original description: CDS=1-1485 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008363 No alias not classified & original description: CDS=285-1409 0.04 OrthoFinder output from all 47 species
Solyc02g078160.3.1 Solyc02g078160 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc03g006410.3.1 Solyc03g006410 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g005480.3.1 Solyc06g005480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g057760.4.1 Solyc09g057760 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g08735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011452_P001 Zm00001e011452 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019800_P002 Zm00001e019800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 11 243
No external refs found!