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  5. LOC_Os11g27400.1

LOC_Os11g27400.1 (LOC_Os11g27400)


Aliases : LOC_Os11g27400

Description : no description available(sp|u5n4e3|nfh1_medtr : 191.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 112.0)


Gene families : OG0000696 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000696_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g27400.1
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00150p00033570 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AT4G19720 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.05 OrthoFinder output from all 47 species
Aev_g11597 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32358 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33209 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47068.t1 Aspi01Gene47068 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47069.t1 Aspi01Gene47069 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47070.t1 Aspi01Gene47070 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53588.t1 Aspi01Gene53588 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene64399.t1 Aspi01Gene64399 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G011300.1 Ceric.26G011300 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g06816 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g47090 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g09286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12194 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16746 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28813 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001059001 No alias Class V chitinase OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01001064001 No alias Class V chitinase OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01001074001 No alias Class V chitinase OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_00910 No alias Class V chitinase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_04927 No alias Class V chitinase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_04931 No alias no description available(sp|a0a072ur65|cht5b_medtr :... 0.03 OrthoFinder output from all 47 species
Gb_10730 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g30770.1 LOC_Os04g30770 no description available(sp|a0a072ur65|cht5b_medtr :... 0.06 OrthoFinder output from all 47 species
Len_g19421 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g37619 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427204g0010 No alias no description available(sp|a0a072ur65|cht5b_medtr :... 0.02 OrthoFinder output from all 47 species
MA_126635g0010 No alias no description available(sp|a0a1b1j8z2|chit5_lotja :... 0.07 OrthoFinder output from all 47 species
MA_83505g0010 No alias Class V chitinase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g24463 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g50672 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65217 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11685 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009944 No alias EC_3.2 glycosylase & original description: CDS=1-1227 0.02 OrthoFinder output from all 47 species
Zm00001e040723_P001 Zm00001e040723 Class V chitinase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 52 381
No external refs found!