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  5. LOC_Os11g33942.1

LOC_Os11g33942.1 (LOC_Os11g33942)


Aliases : LOC_Os11g33942

Description : no hits & (original description: none)


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g33942.1
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00254630 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00151010 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00152840 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00153750 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00153970 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00170960 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00171000 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00023p00171820 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G44710 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G50130 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
Aev_g02345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48410.t1 Aspi01Gene48410 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51578.t1 Aspi01Gene51578 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53577.t1 Aspi01Gene53577 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57933.t1 Aspi01Gene57933 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene62946.t1 Aspi01Gene62946 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45295 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033984001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_15961 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_20047 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os01g21710.1 LOC_Os01g21710 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os06g33350.1 LOC_Os06g33350 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os08g42570.1 LOC_Os08g42570 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g33450.1 LOC_Os11g33450 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g32900.1 LOC_Os12g32900 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g35601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436979g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g11037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c18_15090V3.1 Pp3c18_15090 Plant protein of unknown function (DUF247) 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0185.g024999 No alias not classified & original description: CDS=1-447 0.05 OrthoFinder output from all 47 species
Spa_g25794 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g37795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004158 DUF247_pln 33 190
No external refs found!