1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os11g41610.1

LOC_Os11g41610.1 (LOC_Os11g41610)


Aliases : LOC_Os11g41610

Description : component RPS29 of SSU proteome


Gene families : OG0008810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008810_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g41610.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT3G43980 No alias Ribosomal protein S14p/S29e family protein 0.15 OrthoFinder output from all 47 species
AT3G44010 No alias Ribosomal protein S14p/S29e family protein 0.21 OrthoFinder output from all 47 species
AT4G33865 No alias Ribosomal protein S14p/S29e family protein 0.23 OrthoFinder output from all 47 species
Ceric.06G036200.1 Ceric.06G036200 component *(uS14) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.31G071600.1 Ceric.31G071600 component *(uS14) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Cre08.g358556 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 OrthoFinder output from all 47 species
GSVIVT01015056001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 OrthoFinder output from all 47 species
MA_10436379g0010 No alias component RPS29 of SSU proteome 0.05 OrthoFinder output from all 47 species
MA_336247g0010 No alias component RPS29 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp5g15120.1 No alias component RPS29 of SSU proteome 0.05 OrthoFinder output from all 47 species
Mp8g03910.1 No alias component RPS29 of SSU proteome 0.06 OrthoFinder output from all 47 species
Pp3c14_10190V3.1 Pp3c14_10190 Ribosomal protein S14p/S29e family protein 0.03 OrthoFinder output from all 47 species
Pp3c2_6730V3.1 Pp3c2_6730 Ribosomal protein S14p/S29e family protein 0.04 OrthoFinder output from all 47 species
Solyc06g073430.4.1 Solyc06g073430 component RPS29 of SSU proteome 0.13 OrthoFinder output from all 47 species
Solyc11g020877.1.1 Solyc11g020877 component RPS29 of SSU proteome 0.15 OrthoFinder output from all 47 species
Zm00001e005832_P001 Zm00001e005832 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR001209 Ribosomal_S14 7 56
No external refs found!