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  5. LOC_Os11g42790.1

LOC_Os11g42790.1 (NHX2, ATNHX2, LOC_Os11g42790)


Aliases : NHX2, ATNHX2, LOC_Os11g42790

Description : proton:sodium cation antiporter (NHX)


Gene families : OG0000899 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000899_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g42790.1
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00134170 AT-NHX1, ATNHX1,... Solute transport.carrier-mediated transport.CPA... 0.03 OrthoFinder output from all 47 species
Als_g10801 AT-NHX1, ATNHX1,... proton:sodium cation antiporter *(NHX) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g40957 AT-NHX1, ATNHX1,... proton:sodium cation antiporter *(NHX) & original... 0.03 OrthoFinder output from all 47 species
Len_g56036 NHX2, ATNHX2 proton:sodium cation antiporter *(NHX) & original... 0.03 OrthoFinder output from all 47 species
Sam_g26642 No alias proton:sodium cation antiporter *(NHX) & original... 0.02 OrthoFinder output from all 47 species
Solyc01g067710.3.1 NHX2, ATNHX2,... proton:sodium cation antiporter (NHX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEA Interproscan
MF GO:0015299 obsolete solute:proton antiporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006153 Cation/H_exchanger 26 443
No external refs found!