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  5. LOC_Os11g48110.1

LOC_Os11g48110.1 (ATPAL1, PAL1, LOC_Os11g48110)


Aliases : ATPAL1, PAL1, LOC_Os11g48110

Description : phenylalanine ammonia lyase (PAL)


Gene families : OG0000270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000270_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g48110.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g015318 ATPAL1, PAL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07268 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23282.t1 PAL4, Aspi01Gene23282 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0063.g035292 PAL4 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2358 0.03 OrthoFinder output from all 47 species
Azfi_s0163.g054246 PAL4 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2322 0.02 OrthoFinder output from all 47 species
Azfi_s0205.g057722 PAL4 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2322 0.02 OrthoFinder output from all 47 species
Cba_g28767 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14924 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g24302 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33771 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006148001 PAL4 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
GSVIVT01015138001 ATPAL2, PAL2 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 OrthoFinder output from all 47 species
GSVIVT01024303001 ATPAL1, PAL1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
GSVIVT01025703001 ATPAL2, PAL2 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
Gb_01672 ATPAL2, PAL2 phenylalanine ammonia lyase (PAL) 0.02 OrthoFinder output from all 47 species
Gb_21115 PAL4 phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
Gb_31408 PAL4 phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
Len_g50108 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14564 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40427 ATPAL2, PAL2 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18294 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c10_21810V3.1 PAL4, Pp3c10_21810 phenylalanine ammonia-lyase 4 0.01 OrthoFinder output from all 47 species
Pp3c21_7640V3.1 ATPAL2, PAL2, Pp3c21_7640 phenylalanine ammonia-lyase 2 0.02 OrthoFinder output from all 47 species
Pp3c24_13110V3.1 PAL4, Pp3c24_13110 phenylalanine ammonia-lyase 4 0.01 OrthoFinder output from all 47 species
Zm00001e015156_P001 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 54 532
No external refs found!