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  5. LOC_Os12g01970.1

LOC_Os12g01970.1 (LOC_Os12g01970)


Aliases : LOC_Os12g01970

Description : Probable F-box protein At4g22030 OS=Arabidopsis thaliana (sp|o65451|fb333_arath : 91.7)


Gene families : OG0001367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001367_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g01970.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g16127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13201 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_15744 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_15745 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_15746 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp5g01090.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g35722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g080830.1.1 Solyc02g080830 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc02g080840.1.1 Solyc02g080840 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g080850.1.1 Solyc02g080850 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e014444_P001 Zm00001e014444 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e024925_P001 Zm00001e024925 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR027949 Chloroplast_duf 26 125
IPR027949 Chloroplast_duf 1 27
No external refs found!