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  5. LOC_Os12g04360.1

LOC_Os12g04360.1 (LOC_Os12g04360)


Aliases : LOC_Os12g04360

Description : Probable calcium-binding protein CML36 OS=Arabidopsis thaliana (sp|q9ss31|cml36_arath : 86.3)


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g04360.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00172050 CML39, CML37,... Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
AMTR_s00041p00030040 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
AMTR_s00126p00123680 evm_27.TU.AmTr_v1... Calmodulin-like protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G66400 CML23 calmodulin like 23 0.02 OrthoFinder output from all 47 species
Adi_g057947 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g114422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35874 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43414 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43415 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01734 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27911 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g36096 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g51502 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10189 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07767.t1 Aspi01Gene07767 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07768.t1 Aspi01Gene07768 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene30068.t1 Aspi01Gene30068 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene40089.t1 Aspi01Gene40089 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40092.t1 Aspi01Gene40092 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene40092.t2 Aspi01Gene40092 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40436.t1 TCH2, CML24,... calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67146.t1 Aspi01Gene67146 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G108000.1 Ceric.02G108000 calcium sensor *(CML) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.18G030200.1 Ceric.18G030200 calcium sensor *(CML) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.23G032400.1 TCH2, CML24,... calcium sensor *(CML) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.33G026800.1 Ceric.33G026800 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g07712 UNE14 calcium sensor *(CML) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g03528 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13985 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19027 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27059 TCH2, CML24 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30390 TCH2, CML24 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008421001 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea 0.02 OrthoFinder output from all 47 species
GSVIVT01033567001 No alias Probable calcium-binding protein CML36 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_37768 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os05g31620.1 LOC_Os05g31620 Probable calcium-binding protein CML15 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Lfl_g18783 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
MA_105065g0010 No alias no description available(sp|a0t2m3|polc4_hesar : 121.0) 0.03 OrthoFinder output from all 47 species
MA_1190858g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_194997g0010 No alias no description available(sp|a0t2m3|polc4_hesar : 130.0) 0.02 OrthoFinder output from all 47 species
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Ore_g01310 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02774 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g38119 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27722 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g079420.1.1 Solyc10g079420 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g14324 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g27602 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g37408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016987_P001 Zm00001e016987 Probable calcium-binding protein CML16 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Zm00001e026863_P001 Zm00001e026863 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 128 190
No external refs found!