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  5. LOC_Os12g05780.2

LOC_Os12g05780.2 (LOC_Os12g05780)


Aliases : LOC_Os12g05780

Description : nucleotide sugar transporter (URGT/UXT)


Gene families : OG0001025 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g05780.2
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT1G34020 No alias Nucleotide-sugar transporter family protein 0.04 OrthoFinder output from all 47 species
AT4G09810 No alias Nucleotide-sugar transporter family protein 0.02 OrthoFinder output from all 47 species
Adi_g003659 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.04 OrthoFinder output from all 47 species
Als_g10603 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.04 OrthoFinder output from all 47 species
Aop_g02079 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0601.g078895 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.03 OrthoFinder output from all 47 species
Cba_g20764 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.02 OrthoFinder output from all 47 species
Ceric.06G017400.1 Ceric.06G017400 nucleotide sugar transporter *(URGT/UXT) & original... 0.02 OrthoFinder output from all 47 species
Ceric.27G065500.1 NST-K1,... nucleotide sugar transporter *(URGT/UXT) & original... 0.04 OrthoFinder output from all 47 species
Cre11.g479950 No alias Solute transport.carrier-mediated transport.DMT... 0.02 OrthoFinder output from all 47 species
Dcu_g04566 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g05697 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01013474001 No alias Solute transport.carrier-mediated transport.DMT... 0.04 OrthoFinder output from all 47 species
GSVIVT01034581001 No alias Solute transport.carrier-mediated transport.DMT... 0.04 OrthoFinder output from all 47 species
Nbi_g02186 NST-K1, ATNST-KT1 nucleotide sugar transporter *(URGT/UXT) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013634 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020721 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.02 OrthoFinder output from all 47 species
Solyc12g056640.2.1 Solyc12g056640 nucleotide sugar transporter (URGT/UXT) 0.04 OrthoFinder output from all 47 species
Spa_g02635 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.03 OrthoFinder output from all 47 species
Tin_g01942 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e024049_P001 Zm00001e024049 nucleotide sugar transporter (URGT/UXT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR004853 Sugar_P_trans_dom 24 298
No external refs found!