1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os12g05900.1

LOC_Os12g05900.1 (LOC_Os12g05900)


Aliases : LOC_Os12g05900

Description : ROP-activating protein (RopGAP)


Gene families : OG0000915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000915_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g05900.1
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT2G46710 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.03 OrthoFinder output from all 47 species
Aop_g05032 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11538.t1 Aspi01Gene11538 ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g04225 No alias ROP-activating protein *(RopGAP) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01033865001 No alias Multi-process regulation.Rop GTPase regulatory... 0.02 OrthoFinder output from all 47 species
LOC_Os02g45600.1 LOC_Os02g45600 ROP-activating protein (RopGAP) 0.04 OrthoFinder output from all 47 species
Len_g08086 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g13298 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14837 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01149 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10962 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29250 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30150 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012358 No alias ROP-activating protein *(RopGAP) & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g24684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g084450.4.1 Solyc06g084450 ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species
Spa_g04743 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04660 No alias ROP-activaTing protein *(RopGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e033341_P001 Zm00001e033341 ROP-activating protein (RopGAP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR000198 RhoGAP_dom 170 304
IPR000095 CRIB_dom 107 134
No external refs found!