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  5. LOC_Os12g05980.1

LOC_Os12g05980.1 (LOC_Os12g05980)


Aliases : LOC_Os12g05980

Description : no hits & (original description: none)


Gene families : OG0000217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g05980.1

Target Alias Description ECC score Gene Family Method Actions
Cba_g13460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g64300.1 LOC_Os01g64300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_63850g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sam_g08621 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g54932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019192_P001 Zm00001e019192 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 25 165
No external refs found!