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  5. LOC_Os12g06520.1

LOC_Os12g06520.1 (SUE3, VIP1, LOC_Os12g06520)


Aliases : SUE3, VIP1, LOC_Os12g06520

Description : transcription factor (bZIP)


Gene families : OG0000155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000155_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g06520.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s04408p00000200 ATBZIP34,... RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
Adi_g008976 No alias bZIP class-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106789 No alias bZIP class-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04767 ATBZIP34, BZIP34 bZIP class-L transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03073 No alias bZIP class-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03836 No alias bZIP class-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16590 No alias bZIP class-L transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07065 ATBZIP61, BZIP61 bZIP class-L transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08171 No alias bZIP class-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69117.t1 Aspi01Gene69117 bZIP class-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0154.g053520 No alias bZIP class-I transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g03934 No alias bZIP class-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g78042 ATBZIP61, BZIP61 bZIP class-L transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10345 No alias bZIP class-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07719 No alias bZIP class-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13358 No alias bZIP class-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21762 No alias bZIP class-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024160001 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
LOC_Os12g09250.1 LOC_Os12g09250 transcription factor (bZIP) 0.05 OrthoFinder output from all 47 species
Len_g35260 No alias bZIP class-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435692g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pnu_g02436 No alias bZIP class-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08987 No alias bZIP class-L transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04641 ATBZIP61, BZIP61 bZIP class-L transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06353 No alias bZIP class-L transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g103873.1.1 Solyc01g103873 transcription factor (bZIP) 0.04 OrthoFinder output from all 47 species
Solyc01g110480.4.1 Solyc01g110480 transcription factor (bZIP) 0.07 OrthoFinder output from all 47 species
Solyc06g049040.4.1 Solyc06g049040 transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Solyc07g053450.4.1 ATBZIP34,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Spa_g48009 No alias bZIP class-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018402_P003 Zm00001e018402 transcription factor (bZIP) 0.06 OrthoFinder output from all 47 species
Zm00001e018460_P001 SUE3, VIP1,... transcription factor (bZIP) 0.06 OrthoFinder output from all 47 species
Zm00001e024638_P002 SUE3, VIP1,... transcription factor (bZIP) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004827 bZIP 164 221
No external refs found!