Aliases : LOC_Os12g08140
Description : Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana (sp|p93011|pp182_arath : 570.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os12g08140.1 | |
| Cluster | HCCA: Cluster_344 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g055247 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene06807.t1 | Aspi01Gene06807 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene30666.t1 | Aspi01Gene30666 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000442 | No alias | not classified & original description: CDS=1-3240 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0021.g015640 | No alias | not classified & original description: CDS=1-1965 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0021.g015645 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-1737 | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g023864 | No alias | not classified & original description: CDS=1-2211 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0036.g025743 | No alias | not classified & original description: CDS=1-2553 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0099.g044113 | No alias | not classified & original description: CDS=1-1752 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0229.g059115 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2115 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g06922 | MEF19 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20788 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.20G069700.1 | REME1, Ceric.20G069700 | not classified & original description: pacid=50567174... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g19035 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g27999 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g39652 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g04416 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22169 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g25585 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g27009 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g19380.1 | LOC_Os01g19380 | Putative pentatricopeptide repeat-containing protein... | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os01g45840.1 | LOC_Os01g45840 | Pentatricopeptide repeat-containing protein At2g36730... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g46230.1 | MEF1, LOC_Os01g46230 | RNA editing factor (MEF1) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g58630.1 | LOC_Os01g58630 | Pentatricopeptide repeat-containing protein At5g15300... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g60000.1 | SLO1, LOC_Os01g60000 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g07050.1 | LOC_Os02g07050 | Pentatricopeptide repeat-containing protein At4g20770... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os02g58330.1 | LPA66, LOC_Os02g58330 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g13230.1 | LOC_Os03g13230 | Pentatricopeptide repeat-containing protein At4g37170... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g13830.1 | LOC_Os03g13830 | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g52475.1 | LOC_Os03g52475 | Pentatricopeptide repeat-containing protein At3g28660... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g35610.1 | LOC_Os04g35610 | RNA editing factor (SLO2) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g35650.1 | LOC_Os04g35650 | Pentatricopeptide repeat-containing protein At3g26540... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os05g23960.1 | LOC_Os05g23960 | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g05560.1 | LOC_Os07g05560 | Pentatricopeptide repeat-containing protein At4g21065... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g39090.1 | LOC_Os07g39090 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g39910.1 | LOC_Os07g39910 | Pentatricopeptide repeat-containing protein At1g25360... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g46770.1 | LOC_Os07g46770 | Pentatricopeptide repeat-containing protein At4g21065... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g04400.1 | LOC_Os08g04400 | Pentatricopeptide repeat-containing protein At5g50390,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g25280.1 | LOC_Os08g25280 | Pentatricopeptide repeat-containing protein At4g39530... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os08g38610.1 | LOC_Os08g38610 | Pentatricopeptide repeat-containing protein At1g26900,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g39130.1 | LOC_Os08g39130 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os10g30760.1 | LOC_Os10g30760 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g34720.1 | LOI1, MEF11,... | Putative pentatricopeptide repeat-containing protein... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os10g40920.1 | LOC_Os10g40920 | RNA editing factor (MEF13) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g24530.1 | LOC_Os11g24530 | Pentatricopeptide repeat-containing protein At2g35030,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g37330.2 | LOI1, MEF11,... | RNA editing factor (MEF11) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g01850.1 | LOC_Os12g01850 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g09267 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g12067 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g26316 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g44108 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g54328 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g58477 | CRR2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g04754 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05728 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g04201 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g06242 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28389 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g05329 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05936 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g45723 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g63671 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000612 | No alias | not classified & original description: CDS=302-3289 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0139.g022629 | No alias | not classified & original description: CDS=614-2965 | 0.01 | OrthoFinder output from all 47 species | |
| Solyc07g008480.3.1 | Solyc07g008480 | Pentatricopeptide repeat-containing protein At3g14730... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g20129 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g30138 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44640 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e001918_P001 | EMB2758, Zm00001e001918 | Pentatricopeptide repeat-containing protein At4g33990... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e019482_P001 | Zm00001e019482 | Pentatricopeptide repeat-containing protein At5g48910... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e023504_P001 | CRR22, Zm00001e023504 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027978_P001 | MEF1, Zm00001e027978 | RNA editing factor (MEF1) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |
