1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os12g10640.1

LOC_Os12g10640.1 (LOC_Os12g10640)


Aliases : LOC_Os12g10640

Description : no hits & (original description: none)


Gene families : OG0001410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001410_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g10640.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00151130 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G33290 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT1G73170 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Adi_g108757 SPD1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g112939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30094 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02605 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07290 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18245 SPD1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g06608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15547 SPD1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene71144.t1 SPD1, Aspi01Gene71144 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18558 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G074300.1 SPD1, Ceric.34G074300 not classified & original description: pacid=50622982... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001215.19 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g05731 SPD1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g11178 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02694 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18297 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427944g0010 SPD1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10433691g0010 SPD1 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp5g22990.1 SPD1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g02253 SPD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g19175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10530 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g17362 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21651 SPD1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g08814 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08230 SPD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g09739 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo410877 SPD1 No description available 0.05 OrthoFinder output from all 47 species
Solyc12g014150.3.1 Solyc12g014150 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e000530_P004 Zm00001e000530 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e030045_P004 Zm00001e030045 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 183 274
No external refs found!