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  5. LOC_Os12g13610.1

LOC_Os12g13610.1 (LOC_Os12g13610)


Aliases : LOC_Os12g13610

Description : Chitinase 6 OS=Oryza sativa subsp. japonica (sp|q6k8r2|chi6_orysj : 81.6)


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g13610.1
Cluster HCCA: Cluster_561

Target Alias Description ECC score Gene Family Method Actions
AT3G47540 No alias Chitinase family protein 0.01 OrthoFinder output from all 47 species
Ehy_g04424 HCHIB, B-CHI,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_530083g0010 HCHIB, B-CHI,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA

No InterPro domains available for this sequence

No external refs found!