LOC_Os12g13720.1 (ATPDR5, PDR5, LOC_Os12g13720)

Aliases : ATPDR5, PDR5, LOC_Os12g13720

Description : subfamily ABCG transporter

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os12g13720.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00122p00120860	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Als_g57721	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g61298	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g16268	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g27569	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g28174	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g20896	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g37088	PDR11, ATPDR11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g56716	ABCG40, PDR12,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g70240	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene02125.t1	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.07	OrthoFinder output from all 47 species
Aspi01Gene02127.t1	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.07	OrthoFinder output from all 47 species
Aspi01Gene02142.t1	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene28061.t1	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene36052.t1	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0734.g084221	ATPDR7, PDR7	subfamily ABCG transporter & original description: CDS=3970-4344	0.03	OrthoFinder output from all 47 species
Cba_g10025	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g32414	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g41199	PDR11, ATPDR11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.12G068500.1	ABCG40, PDR12,...	subfamily ABCG transporter & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.1Z322800.1	PDR6, ATPDR6,...	subfamily ABCG transporter & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g13610	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g22063	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g11270	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Gb_37007	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os01g42370.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.08	OrthoFinder output from all 47 species
LOC_Os01g42410.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os02g21340.1	PDR11, ATPDR11,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os07g33780.1	PDR6, ATPDR6,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Lfl_g36609	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g37046	PDR11, ATPDR11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10427561g0010	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
MA_10436632g0010	ABCG40, PDR12,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
MA_10437197g0020	PDR6, ATPDR6	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
MA_17319g0020	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
MA_30116g0010	ABCG40, PDR12,...	no description available(sp\|h6ws94\|pdr1_pethy : 347.0)	0.03	OrthoFinder output from all 47 species
Mp1g25350.1	ATPDR7, PDR7	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Ore_g26168	PEN3, ABCG36,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g27134	ABCG40, PDR12,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g20429	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g08470	PDR11, ATPDR11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g13837	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g57627	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Sam_g07220	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g52599	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo101338	PDR6, ATPDR6	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Smo118688	PDR11, ATPDR11	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo133564	PEN3, ABCG36,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo235359	PDR6, ATPDR6	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Smo426328	PDR6, ATPDR6	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species
Smo441717	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo82705	ATPDR3, PDR3	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Solyc05g055330.3.1	PDR6, ATPDR6,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Spa_g18419	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g28903	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g39516	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g56174	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g21091	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.07	OrthoFinder output from all 47 species
Tin_g24868	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Tin_g31248	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e006460_P001	PDR11, ATPDR11,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Zm00001e020667_P001	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Zm00001e024257_P001	PDR11, ATPDR11,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Zm00001e027850_P001	ABCG40, PDR12,...	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
Zm00001e040575_P001	PDR6, ATPDR6,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	652	804
IPR013525	ABC_2_trans	949	1165
IPR013525	ABC_2_trans	313	524
IPR013581	PDR_assoc	531	581

External Links

No external refs found!

LOC_Os12g13720.1 (ATPDR5, PDR5, LOC_Os12g13720)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation