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  5. LOC_Os12g17090.1

LOC_Os12g17090.1 (LOC_Os12g17090)


Aliases : LOC_Os12g17090

Description : no description available(sp|f7j0n2|rga5r_orysj : 305.0)


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g17090.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00263750 HRT, RCY1, RPP8,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00061p00165330 RPM1, RPS3,... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00061p00207600 evm_27.TU.AmTr_v1... Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00090p00091780 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00190p00029950 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.01 OrthoFinder output from all 47 species
AT3G46730 No alias NB-ARC domain-containing disease resistance protein 0.01 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.26 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
GSVIVT01032828001 No alias Putative disease resistance protein At1g50180... 0.04 OrthoFinder output from all 47 species
Gb_26463 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.02 OrthoFinder output from all 47 species
LOC_Os04g11760.1 LOC_Os04g11760 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g11780.1 LOC_Os04g11780 no description available(sp|f7j0n2|rga5r_orysj : 115.0) 0.01 OrthoFinder output from all 47 species
LOC_Os08g14810.1 ZAR1, LOC_Os08g14810 no description available(sp|p0do08|pikm2_orysj : 132.0) 0.02 OrthoFinder output from all 47 species
Solyc01g086810.2.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g005650.1.1 Solyc03g005650 Probable disease resistance protein At1g58390... 0.01 OrthoFinder output from all 47 species
Solyc03g005670.3.1 Solyc03g005670 Disease resistance RPP8-like protein 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc04g009250.1.1 RPP13, Solyc04g009250 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g009660.2.1 RPP13, Solyc04g009660 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g039410.3.1 Solyc07g039410 Putative disease resistance RPP13-like protein 3... 0.02 OrthoFinder output from all 47 species
Solyc07g039420.1.1 RPP13, Solyc07g039420 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc07g053010.3.1 ZAR1, Solyc07g053010 Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc07g053020.3.1 ZAR1, Solyc07g053020 Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc08g005440.3.1 RPM1, RPS3,... RPM1 effector-triggered immunity CC-NLR-type effector receptor 0.03 OrthoFinder output from all 47 species
Zm00001e011204_P001 Zm00001e011204 no description available(sp|q2r8l1|rga5s_orysj : 371.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041118 Rx_N 12 95
IPR002182 NB-ARC 173 397
No external refs found!