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  5. LOC_Os12g17310.1

LOC_Os12g17310.1 (LOC_Os12g17310)


Aliases : LOC_Os12g17310

Description : WEB family protein At5g55860 OS=Arabidopsis thaliana (sp|q9lvq4|y5586_arath : 258.0)


Gene families : OG0000579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g17310.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AT4G17210 No alias Plant protein of unknown function (DUF827) 0.05 OrthoFinder output from all 47 species
Als_g61404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06972 WEB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47363.t1 Aspi01Gene47363 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14659 WEB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0161.g023914 No alias not classified & original description: CDS=1-2292 0.02 OrthoFinder output from all 47 species
Solyc12g088830.3.1 WEB1, Solyc12g088830 component WEB1 of WEB1-PMI2 cp-actin filament... 0.02 OrthoFinder output from all 47 species
Spa_g08785 WEB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03429 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009948_P001 Zm00001e009948 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1... 0.03 OrthoFinder output from all 47 species
Zm00001e034348_P003 Zm00001e034348 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1... 0.06 OrthoFinder output from all 47 species
Zm00001e039533_P001 Zm00001e039533 WEB family protein At5g55860 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR008545 Web 19 569
No external refs found!