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  5. LOC_Os12g21470.1

LOC_Os12g21470.1 (LOC_Os12g21470)


Aliases : LOC_Os12g21470

Description : no hits & (original description: none)


Gene families : OG0005895 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005895_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g21470.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g31542.1 LOC_Os03g31542 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g56040.1 LOC_Os03g56040 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g17789.1 LOC_Os04g17789 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g08660.1 LOC_Os05g08660 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g13380.1 LOC_Os05g13380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g25930.1 LOC_Os06g25930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g27990.1 LOC_Os06g27990 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g21410.1 LOC_Os08g21410 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g28720.1 LOC_Os08g28720 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g12710.1 LOC_Os11g12710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g23200.1 LOC_Os11g23200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g31860.1 LOC_Os11g31860 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 82 171
No external refs found!