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  5. LOC_Os12g21700.1

LOC_Os12g21700.1 (ZFN1, LOC_Os12g21700)


Aliases : ZFN1, LOC_Os12g21700

Description : C3H zinc finger transcription factor


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os12g21700.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Adi_g108713 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aev_g04017 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ala_g04911 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene35287.t1 Aspi01Gene35287 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0013.g013277 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Cba_g05215 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Cba_g20210 ZFN1 regulatory protein of RNA homeostasis & original... 0.01 OrthoFinder output from all 47 species
Cba_g26989 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ceric.16G041800.1 ZFN1, Ceric.16G041800 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ehy_g05707 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Lfl_g09725 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Pnu_g12395 ZFN3 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Pnu_g17909 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Pnu_g32665 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ppi_g48099 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 160 184
IPR000571 Znf_CCCH 114 138
IPR000571 Znf_CCCH 69 93
IPR000571 Znf_CCCH 320 345
IPR000571 Znf_CCCH 366 391
No external refs found!