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  5. LOC_Os12g24800.1

LOC_Os12g24800.1 (CCD4, NCED4, LOC_Os12g24800)


Aliases : CCD4, NCED4, LOC_Os12g24800

Description : carotenoid cleavage dioxygenase (CCD4)


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g24800.1

Target Alias Description ECC score Gene Family Method Actions
Aob_g21663 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Dac_g10533 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
GSVIVT01032110001 ATCCD1, CCD1,... Secondary metabolism.terpenoids.terpenoid... 0.05 OrthoFinder output from all 47 species
MA_10425950g0010 CCD4, NCED4 carotenoid cleavage dioxygenase (CCD4) 0.03 OrthoFinder output from all 47 species
Pir_g57367 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008061 chitin binding IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 93 567
No external refs found!