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  5. LOC_Os12g25340.1

LOC_Os12g25340.1 (LOC_Os12g25340)


Aliases : LOC_Os12g25340

Description : no hits & (original description: none)


Gene families : OG0002713 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002713_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g25340.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
ChrSy.fgenesh.mRNA.43 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g01530.1 LOC_Os01g01530 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os01g20150.1 LOC_Os01g20150 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os01g24660.1 LOC_Os01g24660 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os01g63740.1 LOC_Os01g63740 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os02g08390.1 LOC_Os02g08390 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os02g29950.1 LOC_Os02g29950 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os02g45020.1 LOC_Os02g45020 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os03g62460.1 LOC_Os03g62460 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g03030.1 LOC_Os04g03030 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g05590.1 LOC_Os04g05590 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g11950.1 LOC_Os04g11950 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g13600.1 LOC_Os04g13600 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g14250.1 LOC_Os04g14250 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g16030.1 LOC_Os04g16030 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os04g19840.1 LOC_Os04g19840 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os04g37870.1 LOC_Os04g37870 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g49070.1 LOC_Os04g49070 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g23770.1 LOC_Os05g23770 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g25020.1 LOC_Os05g25020 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g48530.1 LOC_Os05g48530 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g16010.1 LOC_Os06g16010 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os06g16690.1 LOC_Os06g16690 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g23610.1 LOC_Os06g23610 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
LOC_Os06g33070.1 LOC_Os06g33070 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os06g36420.1 LOC_Os06g36420 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os06g41470.1 LOC_Os06g41470 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g49560.1 LOC_Os06g49560 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os07g11520.1 LOC_Os07g11520 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os07g22860.1 LOC_Os07g22860 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g30550.1 LOC_Os07g30550 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g42020.1 LOC_Os07g42020 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os07g45890.1 LOC_Os07g45890 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os08g04320.1 LOC_Os08g04320 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g05390.1 LOC_Os08g05390 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os08g32810.1 LOC_Os08g32810 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os08g33780.1 LOC_Os08g33780 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os08g36260.1 LOC_Os08g36260 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os08g44990.1 LOC_Os08g44990 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os09g22200.1 LOC_Os09g22200 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os10g14260.1 LOC_Os10g14260 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g08770.1 LOC_Os11g08770 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g12440.1 LOC_Os11g12440 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g27610.1 LOC_Os11g27610 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os11g45864.1 LOC_Os11g45864 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g47070.1 LOC_Os11g47070 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g11260.1 LOC_Os12g11260 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os12g11880.1 LOC_Os12g11880 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g28800.1 LOC_Os12g28800 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g29250.1 LOC_Os12g29250 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g39740.1 LOC_Os12g39740 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g40230.1 LOC_Os12g40230 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 710 809
No external refs found!