LOC_Os12g30620.1 (LOC_Os12g30620)


Aliases : LOC_Os12g30620

Description : Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana (sp|q9ls72|pp261_arath : 334.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g30620.1
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00156450 REME1,... Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00252600 MEF1 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00032p00176600 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AMTR_s00068p00031610 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AMTR_s00078p00195340 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AMTR_s00088p00046850 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
AMTR_s00122p00115170 CRR21 RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
AT1G68930 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 OrthoFinder output from all 47 species
AT1G77010 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G01510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G03880 REME1 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G47840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G08210 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G15720 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G39530 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003333 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034274 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059043 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g128499 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18205 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04345 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17640 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30861 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31006 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36451 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38429 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38788 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07793 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19798 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62803 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15766 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g29475 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16854 EMB2758 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19459 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g28486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12038.t1 Aspi01Gene12038 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20498.t1 CRR2, Aspi01Gene20498 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24271.t1 Aspi01Gene24271 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000446 No alias not classified & original description: CDS=1-2970 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g024030 No alias not classified & original description: CDS=1-1224 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031381 MEF19 not classified & original description: CDS=1-1371 0.03 OrthoFinder output from all 47 species
Azfi_s0094.g043402 No alias not classified & original description: CDS=1-2055 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043642 No alias not classified & original description: CDS=144-2255 0.03 OrthoFinder output from all 47 species
Azfi_s0104.g044769 No alias not classified & original description: CDS=1-2490 0.03 OrthoFinder output from all 47 species
Azfi_s0118.g046614 No alias not classified & original description: CDS=1-2319 0.04 OrthoFinder output from all 47 species
Azfi_s0158.g053860 CRR2 not classified & original description: CDS=1-978 0.06 OrthoFinder output from all 47 species
Azfi_s0288.g063250 No alias not classified & original description: CDS=1-2010 0.03 OrthoFinder output from all 47 species
Azfi_s0471.g072911 No alias not classified & original description: CDS=1-2451 0.05 OrthoFinder output from all 47 species
Cba_g03412 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04691 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05154 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05792 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05929 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11358 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14919 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19570 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20880 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22562 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32456 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34429 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g44396 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75094 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75136 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G051300.1 CRR22, Ceric.04G051300 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.04G112800.1 Ceric.04G112800 not classified & original description: pacid=50632583... 0.05 OrthoFinder output from all 47 species
Ceric.05G086700.1 Ceric.05G086700 not classified & original description: pacid=50579096... 0.03 OrthoFinder output from all 47 species
Ceric.10G014900.1 Ceric.10G014900 not classified & original description: pacid=50613343... 0.03 OrthoFinder output from all 47 species
Ceric.13G010800.1 Ceric.13G010800 not classified & original description: pacid=50634967... 0.03 OrthoFinder output from all 47 species
Ceric.20G040700.1 Ceric.20G040700 not classified & original description: pacid=50566494... 0.03 OrthoFinder output from all 47 species
Ceric.21G004200.1 Ceric.21G004200 not classified & original description: pacid=50602673... 0.03 OrthoFinder output from all 47 species
Ceric.23G059700.1 CRR22, Ceric.23G059700 not classified & original description: pacid=50609689... 0.05 OrthoFinder output from all 47 species
Ceric.26G035200.1 Ceric.26G035200 not classified & original description: pacid=50599772... 0.03 OrthoFinder output from all 47 species
Ceric.31G020200.1 Ceric.31G020200 not classified & original description: pacid=50574865... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.04 OrthoFinder output from all 47 species
Dac_g03344 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18257 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18410 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21618 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30262 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31126 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g33095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33196 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33321 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36017 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43221 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16541 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23282 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003422001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
GSVIVT01003766001 LPA66 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
GSVIVT01007974001 No alias Pentatricopeptide repeat-containing protein At5g61400... 0.03 OrthoFinder output from all 47 species
GSVIVT01009407001 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
GSVIVT01010647001 SLO1 Pentatricopeptide repeat-containing protein At2g22410,... 0.05 OrthoFinder output from all 47 species
GSVIVT01012174001 No alias Pentatricopeptide repeat-containing protein At2g03380,... 0.04 OrthoFinder output from all 47 species
GSVIVT01014727001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.05 OrthoFinder output from all 47 species
GSVIVT01015468001 No alias Pentatricopeptide repeat-containing protein At1g31430... 0.04 OrthoFinder output from all 47 species
GSVIVT01016874001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.05 OrthoFinder output from all 47 species
GSVIVT01017378001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
GSVIVT01017989001 LOI1, MEF11 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01018262001 No alias Pentatricopeptide repeat-containing protein At2g44880... 0.06 OrthoFinder output from all 47 species
GSVIVT01022516001 No alias Pentatricopeptide repeat-containing protein At5g06540... 0.07 OrthoFinder output from all 47 species
GSVIVT01023971001 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.05 OrthoFinder output from all 47 species
GSVIVT01025569001 No alias Pentatricopeptide repeat-containing protein At5g66500,... 0.04 OrthoFinder output from all 47 species
GSVIVT01028022001 No alias Pentatricopeptide repeat-containing protein At3g62890... 0.05 OrthoFinder output from all 47 species
GSVIVT01029254001 OSB4 RNA biosynthesis.organelle machineries.RNA polymerase... 0.06 OrthoFinder output from all 47 species
GSVIVT01030054001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
GSVIVT01030248001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01031265001 LPA66 Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
GSVIVT01033004001 No alias Pentatricopeptide repeat-containing protein At3g26782,... 0.04 OrthoFinder output from all 47 species
GSVIVT01035837001 LPA66 Pentatricopeptide repeat-containing protein At4g21065... 0.05 OrthoFinder output from all 47 species
GSVIVT01036142001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.05 OrthoFinder output from all 47 species
GSVIVT01036757001 OTP84 Pentatricopeptide repeat-containing protein At1g20230... 0.04 OrthoFinder output from all 47 species
GSVIVT01036943001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.04 OrthoFinder output from all 47 species
GSVIVT01037332001 CRR22 Pentatricopeptide repeat-containing protein At1g20230... 0.04 OrthoFinder output from all 47 species
Gb_00776 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.02 OrthoFinder output from all 47 species
Gb_08772 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Gb_10270 No alias RNA editing factor (MEF8). RNA editing factor (BLX) 0.04 OrthoFinder output from all 47 species
Gb_14323 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Gb_17428 No alias Pentatricopeptide repeat-containing protein At4g04370... 0.05 OrthoFinder output from all 47 species
Gb_33210 OTP84 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_33411 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
LOC_Os03g63510.1 LOC_Os03g63510 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
LOC_Os05g05490.1 LOC_Os05g05490 Pentatricopeptide repeat-containing protein At3g05340... 0.05 OrthoFinder output from all 47 species
LOC_Os05g50460.1 LOC_Os05g50460 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
LOC_Os07g15570.1 CRR2, LOC_Os07g15570 Pentatricopeptide repeat-containing protein At2g46050,... 0.05 OrthoFinder output from all 47 species
Len_g02917 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03710 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18592 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18961 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18982 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g26318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g26507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28045 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38488 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g40999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g55705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g56481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g59273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07372 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426444g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_10427342g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
MA_11765g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_118886g0010 CRR22 Pentatricopeptide repeat-containing protein At1g20230... 0.04 OrthoFinder output from all 47 species
MA_14381g0010 EMB2758 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
MA_183278g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
MA_20622g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_39263g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
MA_43615g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_68580g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_805687g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
MA_812716g0010 EMB2758 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
MA_90090g0010 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.04 OrthoFinder output from all 47 species
Msp_g04404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28728 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34152 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48629 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05873 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23758 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26265 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28136 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38653 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g42976 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g10372 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26217 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39379 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13367 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57517 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57968 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63870 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65182 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03998 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07564 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17797 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18475 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53979 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020039 No alias not classified & original description: CDS=1-2721 0.03 OrthoFinder output from all 47 species
Sam_g08034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26414 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g37190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo100216 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo113567 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Smo34767 CRR2 Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
Smo34785 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc01g006920.4.1 Solyc01g006920 Pentatricopeptide repeat-containing protein At4g39530... 0.05 OrthoFinder output from all 47 species
Solyc01g090510.2.1 Solyc01g090510 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc02g005280.1.1 Solyc02g005280 Pentatricopeptide repeat-containing protein At1g50270... 0.1 OrthoFinder output from all 47 species
Solyc02g065030.1.1 EMB2758, Solyc02g065030 Pentatricopeptide repeat-containing protein DOT4,... 0.06 OrthoFinder output from all 47 species
Solyc02g065560.1.1 Solyc02g065560 Pentatricopeptide repeat-containing protein At2g33680... 0.08 OrthoFinder output from all 47 species
Solyc02g068630.1.1 Solyc02g068630 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc02g070710.3.1 Solyc02g070710 Pentatricopeptide repeat-containing protein At3g20730... 0.06 OrthoFinder output from all 47 species
Solyc03g007840.1.1 Solyc03g007840 Putative pentatricopeptide repeat-containing protein... 0.1 OrthoFinder output from all 47 species
Solyc03g025700.2.1 Solyc03g025700 OTP70 plastidial RNA splicing factor 0.03 OrthoFinder output from all 47 species
Solyc03g063690.1.1 MEF1, Solyc03g063690 RNA editing factor (MEF1) 0.05 OrthoFinder output from all 47 species
Solyc03g093630.3.1 CRR2, Solyc03g093630 Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
Solyc03g097850.1.1 Solyc03g097850 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
Solyc03g115790.1.1 CRR28, Solyc03g115790 Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
Solyc03g116000.1.1 Solyc03g116000 Pentatricopeptide repeat-containing protein At3g47530... 0.06 OrthoFinder output from all 47 species
Solyc03g119950.1.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.05 OrthoFinder output from all 47 species
Solyc04g005460.1.1 OTP82, Solyc04g005460 Pentatricopeptide repeat-containing protein At2g20540... 0.05 OrthoFinder output from all 47 species
Solyc04g009000.1.1 Solyc04g009000 RNA editing factor (SLO2) 0.05 OrthoFinder output from all 47 species
Solyc04g063300.3.1 Solyc04g063300 Pentatricopeptide repeat-containing protein At3g26540... 0.07 OrthoFinder output from all 47 species
Solyc04g074160.3.1 Solyc04g074160 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc04g076330.3.1 CRR22, Solyc04g076330 Pentatricopeptide repeat-containing protein At2g29760,... 0.06 OrthoFinder output from all 47 species
Solyc05g009400.3.1 Solyc05g009400 Pentatricopeptide repeat-containing protein At3g29230... 0.05 OrthoFinder output from all 47 species
Solyc06g009500.1.1 Solyc06g009500 Pentatricopeptide repeat-containing protein At2g13600... 0.09 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.06 OrthoFinder output from all 47 species
Solyc06g053850.4.1 Solyc06g053850 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc06g069700.4.1 Solyc06g069700 Pentatricopeptide repeat-containing protein At5g61400... 0.04 OrthoFinder output from all 47 species
Solyc06g082880.2.1 Solyc06g082880 RNA editing factor (MEF13) 0.06 OrthoFinder output from all 47 species
Solyc06g084580.1.1 Solyc06g084580 Pentatricopeptide repeat-containing protein At4g20770... 0.05 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Solyc07g042760.1.1 Solyc07g042760 Pentatricopeptide repeat-containing protein At4g31070,... 0.06 OrthoFinder output from all 47 species
Solyc07g055310.1.1 Solyc07g055310 Pentatricopeptide repeat-containing protein At2g41080... 0.04 OrthoFinder output from all 47 species
Solyc07g062820.1.1 Solyc07g062820 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
Solyc08g023640.1.1 Solyc08g023640 Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
Solyc09g065710.1.1 OTP86, Solyc09g065710 RNA editing factor (OTP86) 0.06 OrthoFinder output from all 47 species
Solyc09g075170.1.1 Solyc09g075170 Pentatricopeptide repeat-containing protein At3g62890... 0.07 OrthoFinder output from all 47 species
Solyc09g082170.4.1 Solyc09g082170 Pentatricopeptide repeat-containing protein At4g14820... 0.07 OrthoFinder output from all 47 species
Solyc10g080220.2.1 Solyc10g080220 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc11g005970.1.1 Solyc11g005970 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
Solyc11g006940.3.1 Solyc11g006940 component Sm-G of U1/U2/U4/U5-associated Sm accessory... 0.03 OrthoFinder output from all 47 species
Solyc11g007230.1.1 Solyc11g007230 Pentatricopeptide repeat-containing protein At3g53360,... 0.04 OrthoFinder output from all 47 species
Solyc11g008940.1.1 CRR2, Solyc11g008940 Pentatricopeptide repeat-containing protein At3g46790,... 0.05 OrthoFinder output from all 47 species
Solyc11g008970.1.1 Solyc11g008970 Pentatricopeptide repeat-containing protein At4g39952,... 0.05 OrthoFinder output from all 47 species
Solyc11g017290.1.1 Solyc11g017290 Pentatricopeptide repeat-containing protein At1g31430... 0.05 OrthoFinder output from all 47 species
Solyc11g067210.1.1 Solyc11g067210 Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
Solyc11g071370.1.1 PDE247, CLB19,... RNA editing factor (CLB19) 0.04 OrthoFinder output from all 47 species
Solyc12g099620.1.1 Solyc12g099620 Pentatricopeptide repeat-containing protein At4g32430,... 0.06 OrthoFinder output from all 47 species
Spa_g01903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09940 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12227 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15000 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23159 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23700 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56457 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15629 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g36053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Zm00001e005246_P001 Zm00001e005246 Pentatricopeptide repeat-containing protein At2g41080... 0.09 OrthoFinder output from all 47 species
Zm00001e010837_P001 LPA66, Zm00001e010837 Pentatricopeptide repeat-containing protein At5g48910... 0.04 OrthoFinder output from all 47 species
Zm00001e011923_P001 Zm00001e011923 Pentatricopeptide repeat-containing protein At4g21300... 0.06 OrthoFinder output from all 47 species
Zm00001e013713_P001 Zm00001e013713 Pentatricopeptide repeat-containing protein At4g20770... 0.04 OrthoFinder output from all 47 species
Zm00001e016281_P001 LPA66, Zm00001e016281 Pentatricopeptide repeat-containing protein At3g62890... 0.03 OrthoFinder output from all 47 species
Zm00001e023333_P001 Zm00001e023333 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Zm00001e024311_P001 Zm00001e024311 Pentatricopeptide repeat-containing protein At1g09410,... 0.03 OrthoFinder output from all 47 species
Zm00001e027978_P001 MEF1, Zm00001e027978 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
Zm00001e030831_P001 Zm00001e030831 Pentatricopeptide repeat-containing protein At3g20730... 0.03 OrthoFinder output from all 47 species
Zm00001e030887_P001 Zm00001e030887 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e031660_P001 Zm00001e031660 Pentatricopeptide repeat-containing protein At4g14170... 0.05 OrthoFinder output from all 47 species
Zm00001e032242_P001 Zm00001e032242 Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
Zm00001e036301_P001 Zm00001e036301 Pentatricopeptide repeat-containing protein At4g30700... 0.02 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.04 OrthoFinder output from all 47 species
Zm00001e041246_P001 Zm00001e041246 Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 81 106
IPR002885 Pentatricopeptide_repeat 51 76
IPR002885 Pentatricopeptide_repeat 213 233
IPR002885 Pentatricopeptide_repeat 314 337
IPR002885 Pentatricopeptide_repeat 138 185
IPR002885 Pentatricopeptide_repeat 238 286
No external refs found!