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  5. LOC_Os12g33620.1

LOC_Os12g33620.1 (LOC_Os12g33620)


Aliases : LOC_Os12g33620

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g33620.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
ChrUn.fgenesh.mRNA.16 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os01g71910.1 LOC_Os01g71910 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g31910.1 LOC_Os03g31910 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os03g47330.1 LOC_Os03g47330 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os04g20460.1 LOC_Os04g20460 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g28650.1 LOC_Os04g28650 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g34850.1 LOC_Os04g34850 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g40240.1 LOC_Os04g40240 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g27860.1 LOC_Os05g27860 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g40400.1 LOC_Os06g40400 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os08g04870.1 LOC_Os08g04870 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g03040.1 LOC_Os09g03040 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g12170.1 LOC_Os09g12170 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os10g11230.1 LOC_Os10g11230 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os12g14820.1 LOC_Os12g14820 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g33060.1 PIN5, LOC_Os12g33060 auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
LOC_Os12g38670.1 LOC_Os12g38670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 32 88
No external refs found!