LOC_Os12g33922.1 (LOC_Os12g33922)

Aliases : LOC_Os12g33922

Description : component ND3/NQO7 of NADH dehydrogenase proton translocation (module P)

Gene families : OG0004953 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004953_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os12g33922.1

Target	Alias	Description	ECC score	Gene Family Method
AT2G07751	No alias	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein	0.06	OrthoFinder output from all 47 species
ATCG00440	NDHC	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein	0.06	OrthoFinder output from all 47 species
Aev_g15970	NDHC	component *(NdhC) of NDH membrane subcomplex M &...	0.08	OrthoFinder output from all 47 species
Aev_g45078	No alias	component *(ND3/NQO7) of NADH dehydrogenase proton...	0.06	OrthoFinder output from all 47 species
Aop_g26379	No alias	component *(ND3/NQO7) of NADH dehydrogenase proton...	0.1	OrthoFinder output from all 47 species
Ceric.02G013900.1	NDHC, Ceric.02G013900	component *(NdhC) of NDH membrane subcomplex M &...	0.08	OrthoFinder output from all 47 species
Ceric.16G042200.1	Ceric.16G042200	not classified & original description: pacid=50589685...	0.03	OrthoFinder output from all 47 species
Ceric.1Z022200.1	NDHC, Ceric.1Z022200	component *(NdhC) of NDH membrane subcomplex M &...	0.03	OrthoFinder output from all 47 species
Ceric.1Z125700.1	Ceric.1Z125700	not classified & original description: pacid=50604569...	0.06	OrthoFinder output from all 47 species
Ceric.1Z247000.1	Ceric.1Z247000	not classified & original description: pacid=50628392...	0.06	OrthoFinder output from all 47 species
Ceric.1Z287100.1	Ceric.1Z287100	not classified & original description: pacid=50577018...	0.06	OrthoFinder output from all 47 species
Ceric.1Z295900.1	Ceric.1Z295900	not classified & original description: pacid=50613699...	0.06	OrthoFinder output from all 47 species
Ceric.1Z314000.1	Ceric.1Z314000	not classified & original description: pacid=50567671...	0.03	OrthoFinder output from all 47 species
Ceric.1Z318400.1	Ceric.1Z318400	not classified & original description: pacid=50579281...	0.06	OrthoFinder output from all 47 species
Cre08.g378900	No alias	NADH-ubiquinone oxidoreductase chain 3 OS=Prototheca wickerhamii	0.04	OrthoFinder output from all 47 species
Gb_11359	No alias	component NdhC of NDH membrane subcomplex M	0.07	OrthoFinder output from all 47 species
Gb_17126	No alias	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
LOC_Os10g38206.1	NDHC, LOC_Os10g38206	component NdhC of NDH membrane subcomplex M	0.04	OrthoFinder output from all 47 species
Lfl_g17857	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Msp_g28154	No alias	component *(ND3/NQO7) of NADH dehydrogenase proton...	0.05	OrthoFinder output from all 47 species
Ore_g41831	NDHC	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Pir_g35629	No alias	component *(ND3/NQO7) of NADH dehydrogenase proton...	0.09	OrthoFinder output from all 47 species
Sam_g01625	No alias	component *(ND3/NQO7) of NADH dehydrogenase proton...	0.16	OrthoFinder output from all 47 species
Solyc09g010890.1.1	NDHC, Solyc09g010890	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003954	NADH dehydrogenase activity	None	Extended
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEA	Interproscan
MF	GO:0009055	electron transfer activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	None	Extended
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0050136	NADH dehydrogenase (quinone) activity	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0004129	cytochrome-c oxidase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009060	aerobic respiration	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000440	NADH_UbQ/plastoQ_OxRdtase_su3	67	151

External Links

No external refs found!

LOC_Os12g33922.1 (LOC_Os12g33922)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation